DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and nek4

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_957306.1 Gene:nek4 / 393987 ZFINID:ZDB-GENE-040426-1392 Length:849 Species:Danio rerio


Alignment Length:857 Identity:207/857 - (24%)
Similarity:311/857 - (36%) Gaps:235/857 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            :..|..:.|:|.||:|....||.||..:.:..|.:|.......:..|...|..:|.||:|||||.
Zfish     1 MDGYLFVRVVGKGSYGEVNLVRHKSDRKQYVIKKLNLRTSSRRERRAAEQEAQLLSQLKHPNIVM 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARS----QRQRFEEPYIWRVLFQLCRALQVCHNK 141
            |.......:.: :||||..|.||||...:::.:.    :||..|    |.|  |:..|||..|.|
Zfish    66 YRESWEGEDCQ-LYIVMGFCEGGDLYHRLKQQKGELLPERQVVE----WFV--QIAMALQYLHEK 123

  Fly   142 IPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRK 206
                .|||||:|..||||......|:||.|:||:|......|::.:|||:||||||...:.|:.|
Zfish   124 ----HILHRDLKTQNIFLTKTNIIKVGDLGIARVLENQNDMASTLIGTPYYMSPELFSNKPYNYK 184

  Fly   207 SDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPG 271
            |||||:||.||||..|:..|..:..:.|..:|.:|:..::|:.|...|.|:|..||....|.||.
Zfish   185 SDVWALGCCVYEMATLKHAFNAKDMNSLVYRIVEGKLPQMPSKYDPQLGELIKRMLCKKPEDRPD 249

  Fly   272 IEVIIRHPLVVRNIS----------------ELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGV 320
            ::.|:|.|.:...||                ..:||   |..:|.|..|.|:..          |
Zfish   250 VKHILRQPYIKHQISMFLEATKEKTAKSRKNAANGK---LNSAGSDASTKPNQV----------V 301

  Fly   321 HPE-LSSTMFTEQYSFNEGYGQRRLSVTGVF--------------TPDLRS------------EL 358
            .|: |:|...|......|.|..|:....|.:              |.|:.:            ::
Zfish   302 QPQCLNSESKTCGKKAEEIYLNRQKPCNGAWENVAPKHHMPPKSPTRDIHNSTGQSIATISNIDI 366

  Fly   359 FYSAKRKIFPAKKLQLSDPSLYESIRREERAE--------ERQV--------------------- 394
            ....:||..|.|.....:.:|....:|.|:.:        .:||                     
Zfish   367 EIQKQRKAKPPKPSSHQNNNLPSVSKRREKEDPGAPQTHPHKQVSGVGGTEDKMSANASSITPKP 431

  Fly   395 ------------------------ELAEE---------------RRRKKDQEQQKRDQE----LL 416
                                    :|.:|               ...:|.:.|:..|.:    :|
Zfish   432 ADRTKMPNKSKALDVSLDIKDDTMKLLQEAGVQDLPYEPTELHHNAEQKTESQRTADNQSNAGVL 496

  Fly   417 KEAPS------SPRALTQN---------IFDEVLKTRLHAIRAQESLLQQKLEELQTREQELQLA 466
            |:||:      |..:|...         ||.|..::...|..:.|........|.....|..|..
Zfish   497 KDAPTGSSTEESEGSLDSTEKLLKPVPVIFMEPSRSESPAALSDEGRPSSSSSEPSMSRQRRQRR 561

  Fly   467 EQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIELNETSPTVAKLNLA 531
            :.:.|.|:..:|||:          .:|: ||:|  :...|...|......|:.|:.:..:.|  
Zfish   562 KDKSQDLQNGIQEKV----------SRPL-PPLP--EDGNSAQKDQSTPAGLSSTNKSTEQQN-- 611

  Fly   532 TLPAPKSLNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTGVP------------------ 578
               .|.|....|::  |..|       ||....||. ||..|...||                  
Zfish   612 ---RPLSARERRRL--KQSQ-------ENSTQQAVS-AVKRPSCDVPSLDSEQIHQTDCPRAART 663

  Fly   579 ---------MQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRVQR 634
                     .....|..|...|..|||.|..     |..|..|..|..:..:.| .......:..
Zfish   664 TVDTTKERKSSRKQSDEDECSSSTSSTERSE-----GDYRERKCESNEMQDLVQ-TMTQTLHMDG 722

  Fly   635 PPLAVKPPITQEQPAEVPPVANLWTKEQKKQAFELLAAMNAAEREASGG-GVVG------SGPGG 692
            ...:.:|...:.....:|..     |..:|....|:  ::...|||.|. .:.|      :||..
Zfish   723 KDASFEPDGPRCHSTPLPEF-----KLNRKYRDTLM--LHGKSREAQGDLQITGFPLDDSTGPAK 780

  Fly   693 ARR--QHLRQSV 702
            .||  :|||..|
Zfish   781 VRRVIEHLRTDV 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 101/266 (38%)
S_TKc 19..281 CDD:214567 101/265 (38%)
nek4NP_957306.1 STKc_Nek4 3..259 CDD:270862 101/266 (38%)
S_TKc 4..259 CDD:214567 101/265 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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