DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and Nek6

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_891998.1 Gene:Nek6 / 360161 RGDID:727779 Length:313 Species:Rattus norvegicus


Alignment Length:268 Identity:100/268 - (37%)
Similarity:155/268 - (57%) Gaps:16/268 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TLQDYEVLAVMGNGSFGTCYK---VRDKSTGELFAWKGMNYDELDEAKC-DALVSEISVLRQLQH 75
            :|.|:::...:|.|.|...||   :.|:.|   .|.|.:...|:.:||. ...|.||.:|:||.|
  Rat    41 SLADFQIEKKIGRGQFSEVYKATCLLDRKT---VALKKVQIFEMMDAKARQDCVKEIGLLKQLNH 102

  Fly    76 PNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHN 140
            |||::|....:  |...:.||:|....|||:|:::..:.|::...|..:|:...|||.|::..|:
  Rat   103 PNIIKYLDSFI--EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS 165

  Fly   141 KIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDR 205
            :    .::||||||||:|:.|.|..||||.||.|....:.:.|.|.||||:|||||.:....|:.
  Rat   166 R----RVMHRDIKPANVFITATGIVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNF 226

  Fly   206 KSDVWAVGCLVYEMCALRPPFRGRAFD--QLSEKIAQGEFSRIPA-IYSTDLQEIIAFMLAVDHE 267
            |||:|::|||:|||.||:.||.|...:  .|.:||.|.::..:|. .||..|:|:::..:..|..
  Rat   227 KSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCIYPDPN 291

  Fly   268 QRPGIEVI 275
            .||.||.:
  Rat   292 HRPDIEYV 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 99/265 (37%)
Nek6NP_891998.1 Interaction with ARHGAP33, ANKRA2, CDC42, PRDX3, RAD26L, RBBP6, RPS7 and TRIP4. /evidence=ECO:0000250 1..44 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
STKc_Nek6_7 44..305 CDD:270863 99/265 (37%)
Interaction with APBB1. /evidence=ECO:0000250 267..270 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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