DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and Nek1

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_038950287.1 Gene:Nek1 / 290705 RGDID:1309375 Length:1261 Species:Rattus norvegicus


Alignment Length:754 Identity:184/754 - (24%)
Similarity:296/754 - (39%) Gaps:192/754 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::.|..|..:|.||||....|:....|..:..|.:|...:.:.:.:....|::||..::||||||
  Rat     1 MEKYVRLQKIGEGSFGKAVLVKSTEDGRHYVIKEINISRMSDKEREESRREVAVLANMKHPNIVQ 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQR-QRFEEPYIWRVLFQLCRALQVCHNKIPN 144
            |....  .|..|:||||:.|.||||   .:|..:|: ..|:|..|.....|:|.||:..|::   
  Rat    66 YKESF--EENGSLYIVMDYCEGGDL---FKRINAQKGTLFQEDQILDWFVQICLALKHVHDR--- 122

  Fly   145 GTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             .|||||||..||||...|..:|||||:||:|......|.:.:|||:|:|||:.:.:.|:.|||:
  Rat   123 -KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDI 186

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEV 274
            ||:||::||:|.|:..|.......|..||..|.|..:...||.||:.:::.:...:...||.:..
  Rat   187 WALGCVLYELCTLKHAFEAGNMKNLVLKIISGSFPPVSLHYSYDLRSLLSQLFKRNPRDRPSVNS 251

  Fly   275 IIRHPLVVRNISELDGKF--PILVDSGEDF----------YTLPSGARLFEDEEEDGVHPELSST 327
            |:....:.:.|.    ||  |.|:  .|:|          ..:| |.|....:......|....|
  Rat   252 ILEKGFIAKRIE----KFLSPQLI--AEEFCLKTVSKFGPQPIP-GKRPASGQGVSSFVPAQKIT 309

  Fly   328 MFTEQYSF---NEGYGQRRLSVTGVFTPDLRSELFYSAKRK---IFPAKKLQLSDPSLYESIRRE 386
            ..:.:|..   .:.||.::|           .|.....|.|   ..|.||:...:.....|   |
  Rat   310 KPSAKYGVPITYKKYGDKKL-----------LEKKPPPKHKQAHQIPVKKMNSGEERKKMS---E 360

  Fly   387 ERAEERQVELAEERRRKKDQ------EQQKRDQE------------------------------- 414
            |.|::|::|..|:.:::|||      ||.||.::                               
  Rat   361 EAAKKRRLEFIEKEKKQKDQIRFLKAEQLKRQEKQRLERINRAREQGWRNVLRAGGSGEVKASFF 425

  Fly   415 ----LLKEAPSSPRALTQN---IFDEVLKTR------------------------LHAIRAQ--E 446
                .:..:|.|||...::   |||::.:.|                        |...||:  |
  Rat   426 GSGGAVSPSPCSPRGQYEHYHAIFDQMQQLRAEDNEARWKGRIYGRWLPERQKGHLGVERAKQVE 490

  Fly   447 SLLQQKLEELQ--------------------------------TREQELQLAEQRVQTLE----- 474
            ..||:|.|.:|                                .:|:|:.||..|...|:     
  Rat   491 EFLQRKQEAMQNKARAEGHVGILQNLASLYGGRPSSSRGGKPRNKEEEVYLARLRQIRLQNFNER 555

  Fly   475 RQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIELNETSPTVAKLNLATLPAPKSL 539
            :|::.||..:.|....              .|.........:.|.:.....|:.|.......:.|
  Rat   556 QQIKAKLRGENKEAGG--------------TKGQDATEEADMRLKKMESLKAQANARAAVLKEQL 606

  Fly   540 NTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTGVPMQMSVSSNDSGDSQASSTRRKSILS- 603
            ...||..::..:|.    .|......||.:..||        |:..:::|.| .|..:.|.::| 
  Rat   607 ERKRKEAYEREKKV----WEEHLVVRVKSSDVPP--------SMEHHEAGGS-PSQQQMKPVISV 658

  Fly   604 --------LFGLSRGSKATSKSLPSVNQVAQAAATRVQR 634
                    |.|....|:.||:.:...|....:....::|
  Rat   659 TSALKEVGLDGSLTESQETSEEMEKSNNAISSKREILRR 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 95/263 (36%)
Nek1XP_038950287.1 STKc_Nek1 3..258 CDD:270858 95/263 (36%)

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