DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and Nek8

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001099274.1 Gene:Nek8 / 287473 RGDID:1306897 Length:698 Species:Rattus norvegicus


Alignment Length:269 Identity:94/269 - (34%)
Similarity:156/269 - (57%) Gaps:10/269 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::.||.:.|:|.|:||..:....|:..:|...|.:..:::.:.:..|..:|..||:.|.|||:::
  Rat     1 MEKYERIRVVGRGAFGIVHLCLRKADQKLVIIKQIPVEQMTKEERQAAQNECQVLKLLNHPNVIE 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNG 145
            ||.:.:  |.|::.|.||...||.||:.:|:..:  ...||..|.....|:..||...|..:   
  Rat    66 YYENFL--EDKALMIAMEYAPGGTLAEFIQKRCN--SLLEEETILHFFVQILLALHHVHTHL--- 123

  Fly   146 TILHRDIKPANIFLDAAGN-AKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             |||||:|..||.||.... .|:||||::::| ..:|.|.:.||||.|:||||.:|:.|::|||:
  Rat   124 -ILHRDLKTQNILLDKHRMVVKIGDFGISKIL-SSKSKAYTVVGTPCYISPELCEGKPYNQKSDI 186

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEV 274
            ||:||::||:.:|:..|.......|..||..|.|:.|...||.:|::::..:|:::..|||.:..
  Rat   187 WALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPELRQLVLSLLSLEPAQRPPLSH 251

  Fly   275 IIRHPLVVR 283
            |:..||.:|
  Rat   252 IMAQPLCIR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 92/263 (35%)
Nek8NP_001099274.1 STKc_Nek8 3..258 CDD:270859 92/263 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..307
ATS1 401..>690 CDD:444065
RCC1 1 415..466
RCC1 2 467..518
RCC1 3 520..571
RCC1 4 585..636
RCC1 5 638..689
Blue background indicates that the domain is not in the aligned region.

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