DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and SERGEF

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_036271.1 Gene:SERGEF / 26297 HGNCID:17499 Length:458 Species:Homo sapiens


Alignment Length:55 Identity:15/55 - (27%)
Similarity:25/55 - (45%) Gaps:8/55 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ESAGMDFSQK----TLQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDEL 55
            |:|.:...||    ..|:.:|.|:..    |..:.|....||::|.|...:|.:|
Human   247 EAAFLPVPQKIEAHCFQNEKVTAIWS----GWTHLVAQTETGKMFTWGRADYGQL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 10/38 (26%)
S_TKc 19..281 CDD:214567 10/37 (27%)
SERGEFNP_036271.1 RCC1 1 15..67
RCC1 23..64 CDD:278826
RCC1 2 68..119
RCC1 68..116 CDD:278826
RCC1_2 103..132 CDD:290274
RCC1 119..167 CDD:278826
RCC1 3 120..171
RCC1 4 172..230
RCC1_2 219..243 CDD:290274
RCC1 5 231..283 9/39 (23%)
RCC1 231..279 CDD:278826 8/35 (23%)
RCC1 6 284..351 5/14 (36%)
RCC1 284..348 CDD:278826 5/14 (36%)
RCC1 351..399 CDD:278826
RCC1 7 352..402
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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