DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and fin1

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_593305.1 Gene:fin1 / 2542237 PomBaseID:SPAC19E9.02 Length:722 Species:Schizosaccharomyces pombe


Alignment Length:804 Identity:196/804 - (24%)
Similarity:324/804 - (40%) Gaps:225/804 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::.|::|..:|:||||..|||:....|.|.|.|.:::..:...:...:..|:::||.|:||||||
pombe     1 MEKYKILECIGHGSFGRIYKVQRLKDGALLAQKEIHFGNITRQEKQYIADEVNILRNLKHPNIVQ 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCH------ 139
            |....:||.|:.:.:.||.|..||||.::||.:.:::||.|..:.:...||..||..||      
pombe    66 YCGEELNRSAQVINLYMEYCGHGDLANLIQRYKEEKKRFTEQEVLKFFTQLLLALYRCHYGENAP 130

  Fly   140 -------NKI--PNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSP 195
                   .:|  |..::|||||||||||||...:.|||||||:::|...:.|..|:||||:||||
pombe   131 ACDSQWPREIFHPKQSVLHRDIKPANIFLDENNSVKLGDFGLSKLLDNTRVFTQSYVGTPYYMSP 195

  Fly   196 ELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAF 260
            |:::...|..||||||:||:::|:|.|..||.||::.:|...|.||..|.....||.|:..:|..
pombe   196 EIIRSSPYSAKSDVWALGCVIFEICMLTHPFEGRSYLELQRNICQGNLSCWDHHYSDDVFLLIRH 260

  Fly   261 MLAVDHEQRPGIEVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELS 325
            .|.|:.:.||....::|.|::....|:|:.:..:|                   |:.|.:|.:..
pombe   261 CLEVNSDLRPTTYQLLRSPILSDIRSKLESERVVL-------------------EQSDLLHKKHQ 306

  Fly   326 STMFTEQYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAE 390
            ..:                        .|.::|.:                        ||:|..
pombe   307 MLI------------------------QLENDLQF------------------------REQRLS 323

  Fly   391 ERQVELAEERRRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEE 455
            .|:.||                                   :.|:.:||   ..:|.:|:::||:
pombe   324 ARESEL-----------------------------------ENVIASRL---AQREEILRRELEK 350

  Fly   456 LQTREQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTY--CTIEL 518
             |.|:.:.:. ::.:||:...||             :..:..|:...:..:|...:.:  ||||.
pombe   351 -QLRDMDARY-QRHMQTVVNSMQ-------------KMRVTSPVDHNEQPESSTAEMFVDCTIEA 400

  Fly   519 NETSPT--VAKLN----LATLPAPKSLNTLRKVTFKSP--------------------------- 550
            :: ||.  :.||.    |.||..|....|.::...|.|                           
pombe   401 SQ-SPLLHIPKLGISKPLQTLSCPGFTLTTQQPILKRPTLRKELSSRALHTTATLMKYRANASSL 464

  Fly   551 ---------------QKFVTYGIENMPPPAVKPAVNPPPTGVPMQMSVSSNDSGDSQASSTRRKS 600
                           ||   .|..|.....:...::....|..:..|...|...|.:....|:.|
pombe   465 RTTPIDKDGQITSLQQK---NGTSNQVADCMNKLLHTSLDGKKLSPSELCNKFSDGEGLPNRKVS 526

  Fly   601 ILSLFGLSRGSKATS-KSLPSVNQVAQAAATRVQRPPLAVKPPITQEQPAEVPPVANLWTKEQKK 664
            .||:........|:| :|:|:     .:..|..:...:.|.||..|....|.....|:.:.|..|
pombe   527 KLSVESDETAVSASSGESVPT-----DSTLTDTKSKSVFVHPPSPQSLYVEKLEKLNIRSDEVSK 586

  Fly   665 ----------QAFELLAA---MNAAEREASGGGVVGSGPGGARRQH-----------------LR 699
                      .|...||:   ::|.|:.|....:.|:.......||                 .:
pombe   587 PSKASKTLHGYALPSLASPYDVHAEEKIARENEMDGNFKTMKINQHPDEYVLRTPKKIQLLEGQK 651

  Fly   700 QSVRERNSTLQRNRMRRSLVVATG 723
            :|..::...|..|::|||.:...|
pombe   652 RSPVKQLGRLGYNKLRRSAMDNAG 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 111/277 (40%)
fin1NP_593305.1 STKc_Nek2 3..281 CDD:270857 111/277 (40%)

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