DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and nekl-1

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001293320.1 Gene:nekl-1 / 189769 WormBaseID:WBGene00021461 Length:983 Species:Caenorhabditis elegans


Alignment Length:690 Identity:153/690 - (22%)
Similarity:253/690 - (36%) Gaps:192/690 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYH 83
            ||.:..:|.|:||:....|.:....|...|.:|..:||.::....::|:|:|.:::||||:.||.
 Worm   171 YERIRTVGKGAFGSAVLYRRREDSSLVIIKEINMYDLDSSQRRLALNEVSLLSRIEHPNIIAYYD 235

  Fly    84 HLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTIL 148
            ..  .|...:.|.||...||.|||::.|.::   ..:|..|..::.|:|.|:...|    ..::|
 Worm   236 SF--EEEGVLMIEMEYADGGTLAQMLSRTQN---LLDEEQIGDMMIQMCSAVAYLH----ENSVL 291

  Fly   149 HRDIKPANIFLDAAGNAKLGDFGLARMLRRD--QSFAASFVGTPHYMSPELVKGRKYDRKSDVWA 211
            |||:|.||:||......|:||||:::::..:  ...|.:.||||:|:|||:..|..|:.|||:||
 Worm   292 HRDLKTANVFLTRDSFVKIGDFGISKIMGTETLAQGAKTVVGTPYYISPEMCSGVSYNEKSDMWA 356

  Fly   212 VGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVII 276
            :||::||||.|:..|.|.....|...|....::.:...||.:::.:|..:|.:|.::||      
 Worm   357 LGCILYEMCCLKKAFEGDNLPALVNSIMTCAYTPVKGPYSAEMKMVIRELLQLDPQKRP------ 415

  Fly   277 RHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGYGQ 341
                                       :.|...::....|..  |...|.:| ....||...|..
 Worm   416 ---------------------------SAPQALKMLRPSENR--HRHTSGSM-RSSVSFTTLYDL 450

  Fly   342 RRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRKKDQ 406
            ...::|....|||.|                               |...:||.|:     |...
 Worm   451 HVPTITLSSIPDLPS-------------------------------RISIKQVALS-----KTHT 479

  Fly   407 EQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQT------------- 458
            .....|.||.....:|...|....|.::...||     .|||..:.::.:..             
 Worm   480 MVLTNDNELFGFGDNSCGQLGFGKFSKMENGRL-----VESLKGRDIQSVGVGNYFSVICCDRGT 539

  Fly   459 -----REQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIEL 518
                 ..:.|.|.:....:.:..:.|:||::......|                .||.....:|.
 Worm   540 LLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYC----------------GHDHVVAVLES 588

  Fly   519 NET----SPTVAKLNLATL---------PAPKS-------------------------------- 538
            .|.    |....:|.|.||         |.|.:                                
 Worm   589 GECLGWGSNQYGQLGLPTLEHFFAPTKIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNK 653

  Fly   539 LNTLRKVTF-----KSPQKFVTYG--IENMPPPAVKPAVNPPPTGVPMQ----MSVSSNDSGDSQ 592
            ||..::|.|     |:|..:|...  ::..|...|..:|....:||.::    |....||:.:  
 Worm   654 LNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTE-- 716

  Fly   593 ASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRV 632
                        .||....|...:.:..|..:...|.|.|
 Worm   717 ------------LGLGNSQKMAVRCVKPVKSLLHHACTHV 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 85/263 (32%)
nekl-1NP_001293320.1 STKc_Nek 170..423 CDD:270855 86/293 (29%)
ATS1 471..>765 CDD:444065 54/314 (17%)

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