DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and nekl-1

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001293320.1 Gene:nekl-1 / 189769 WormBaseID:WBGene00021461 Length:983 Species:Caenorhabditis elegans


Alignment Length:690 Identity:153/690 - (22%)
Similarity:253/690 - (36%) Gaps:192/690 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYH 83
            ||.:..:|.|:||:....|.:....|...|.:|..:||.::....::|:|:|.:::||||:.||.
 Worm   171 YERIRTVGKGAFGSAVLYRRREDSSLVIIKEINMYDLDSSQRRLALNEVSLLSRIEHPNIIAYYD 235

  Fly    84 HLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTIL 148
            ..  .|...:.|.||...||.|||::.|.::   ..:|..|..::.|:|.|:...|    ..::|
 Worm   236 SF--EEEGVLMIEMEYADGGTLAQMLSRTQN---LLDEEQIGDMMIQMCSAVAYLH----ENSVL 291

  Fly   149 HRDIKPANIFLDAAGNAKLGDFGLARMLRRD--QSFAASFVGTPHYMSPELVKGRKYDRKSDVWA 211
            |||:|.||:||......|:||||:::::..:  ...|.:.||||:|:|||:..|..|:.|||:||
 Worm   292 HRDLKTANVFLTRDSFVKIGDFGISKIMGTETLAQGAKTVVGTPYYISPEMCSGVSYNEKSDMWA 356

  Fly   212 VGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVII 276
            :||::||||.|:..|.|.....|...|....::.:...||.:::.:|..:|.:|.::||      
 Worm   357 LGCILYEMCCLKKAFEGDNLPALVNSIMTCAYTPVKGPYSAEMKMVIRELLQLDPQKRP------ 415

  Fly   277 RHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGYGQ 341
                                       :.|...::....|..  |...|.:| ....||...|..
 Worm   416 ---------------------------SAPQALKMLRPSENR--HRHTSGSM-RSSVSFTTLYDL 450

  Fly   342 RRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRKKDQ 406
            ...::|....|||.|                               |...:||.|:     |...
 Worm   451 HVPTITLSSIPDLPS-------------------------------RISIKQVALS-----KTHT 479

  Fly   407 EQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQT------------- 458
            .....|.||.....:|...|....|.::...||     .|||..:.::.:..             
 Worm   480 MVLTNDNELFGFGDNSCGQLGFGKFSKMENGRL-----VESLKGRDIQSVGVGNYFSVICCDRGT 539

  Fly   459 -----REQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIEL 518
                 ..:.|.|.:....:.:..:.|:||::......|                .||.....:|.
 Worm   540 LLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYC----------------GHDHVVAVLES 588

  Fly   519 NET----SPTVAKLNLATL---------PAPKS-------------------------------- 538
            .|.    |....:|.|.||         |.|.:                                
 Worm   589 GECLGWGSNQYGQLGLPTLEHFFAPTKIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNK 653

  Fly   539 LNTLRKVTF-----KSPQKFVTYG--IENMPPPAVKPAVNPPPTGVPMQ----MSVSSNDSGDSQ 592
            ||..::|.|     |:|..:|...  ::..|...|..:|....:||.::    |....||:.:  
 Worm   654 LNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTE-- 716

  Fly   593 ASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRV 632
                        .||....|...:.:..|..:...|.|.|
 Worm   717 ------------LGLGNSQKMAVRCVKPVKSLLHHACTHV 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 85/263 (32%)
S_TKc 19..281 CDD:214567 85/263 (32%)
nekl-1NP_001293320.1 STKc_Nek 170..423 CDD:270855 86/293 (29%)
ATS1 449..764 CDD:227511 60/367 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157636
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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