DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nek2 and Nek2

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_035022.2 Gene:Nek2 / 18005 MGIID:109359 Length:443 Species:Mus musculus


Alignment Length:492 Identity:177/492 - (35%)
Similarity:258/492 - (52%) Gaps:82/492 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::|||||..:|.||:|.|.|:|.||.|::..||.::|..:.|.:...||||:::||:|:|||||.
Mouse     5 VEDYEVLHSIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEVEKQMLVSEVNLLRELKHPNIVS 69

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNG 145
            ||..:::|...::|||||.|.|||||.::.:....||..||.::.||:.||..||:.||.:...|
Mouse    70 YYDRIIDRTNTTLYIVMEYCEGGDLASVISKGTKDRQYLEEEFVLRVMTQLTLALKECHRRSDGG 134

  Fly   146 -TILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             |:||||:||||:|||:..|.|||||||||:|..|.|||.:|||||:|||||.:....|:.|||:
Mouse   135 HTVLHRDLKPANVFLDSKHNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMSCLSYNEKSDI 199

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQ--LSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGI 272
            |::|||:||:|||.|||  .||:|  |:.||.:|.|.|||..||..|.::|..||.:....||.:
Mouse   200 WSLGCLLYELCALMPPF--TAFNQKELAGKIREGRFRRIPYRYSDGLNDLITRMLNLKDYHRPSV 262

  Fly   273 EVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNE 337
            |.|:..||:...::|                                           ||....|
Mouse   263 EEILESPLIADLVAE-------------------------------------------EQRRNLE 284

  Fly   338 GYGQRRLSVTGVFTPD---LRSELFYSAKRKIFPAKKLQLSDPSLYESIR-REERAEERQVELAE 398
            ..|:|....:.:  ||   :.|||         ..|:.||.|..  :::| ||:..|:::.||..
Mouse   285 RRGRRSGEPSKL--PDSSPVLSEL---------KLKERQLQDRE--QALRAREDILEQKERELCI 336

  Fly   399 ERRRKKDQ----EQQKRDQELLKE-------------APSSPRALTQNIFDEVLKTRLHAIRAQE 446
            ..|..:|:    |...::..||||             .|||......:...|..:....:..::.
Mouse   337 RERLAEDKLARAESLMKNYSLLKEHRLLCLAGGPELDLPSSAMKKKVHFHGESKENTARSENSES 401

  Fly   447 SLLQQKLEELQTREQELQLAEQRVQTLERQMQEKLLQ 483
            .|.:.|..:|:.|....||..|.:..:|:..|.|..|
Mouse   402 YLAKSKCRDLKKRLHAAQLRAQALADIEKNYQLKSRQ 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 133/265 (50%)
S_TKc 19..281 CDD:214567 132/264 (50%)
Nek2NP_035022.2 STKc_Nek2 7..271 CDD:270857 134/266 (50%)
S_TKc 8..271 CDD:214567 133/265 (50%)
Interaction with PCNT. /evidence=ECO:0000250 264..443 37/199 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..303 0/20 (0%)
Interaction with CEP85. /evidence=ECO:0000250|UniProtKB:P51955 301..443 33/162 (20%)
Leucine-zipper 306..334 5/27 (19%)
Necessary for interaction with MAD1L1. /evidence=ECO:0000250 329..443 30/134 (22%)
Required for microtubule binding and for localization to the centrosomes. /evidence=ECO:0000250 333..370 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..402 5/22 (23%)
Interaction with SAV1 and STK3/MST2. /evidence=ECO:0000250 402..437 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 274 1.000 Domainoid score I1755
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 1 1.000 - - oto95196
orthoMCL 1 0.900 - - OOG6_104455
Panther 1 1.100 - - LDO PTHR43671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R445
SonicParanoid 1 1.000 - - X4876
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.900

Return to query results.
Submit another query.