DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and mekk-3

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_492629.1 Gene:mekk-3 / 172850 WormBaseID:WBGene00013694 Length:430 Species:Caenorhabditis elegans


Alignment Length:325 Identity:77/325 - (23%)
Similarity:134/325 - (41%) Gaps:82/325 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEVLAVMGNGSFGTCYKVRDKSTG----ELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIV 79
            |.:..::|.|:.|:.|....|..|    ::.:..|.:..:  ||       ::..||.|:|..||
 Worm   157 YSLGKLIGRGTLGSVYLAEGKKGGTYAVKIISKHGRHLPQ--EA-------DVEYLRMLRHVRIV 212

  Fly    80 QYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPN 144
            :|.:.:...::..::|:||....|.|.:.:.|.........:.|..::|    ..|:..|:|   
 Worm   213 EYLYIIEPSKSNDIHILMEYMHTGSLQEYIARTGPLHHELVKAYAKQIL----EGLEFLHSK--- 270

  Fly   145 GTILHRDIKPANIFLDAAGN---AKLGDFGLARM--LRRDQSFAASFVGTPHYMSPELVKGRKYD 204
             .|:|:|:||||:.|.....   .|:.|||.:|.  |:|::.....  .||.|..|.:..||...
 Worm   271 -NIIHQDLKPANLLLKNTHRERLIKIADFGSSRFSSLKREREGQQG--RTPKYTDPGVSLGRHVS 332

  Fly   205 -RKSDVWAVGCLVYEMCALRPPFR---------GRAFDQ------LSEKIAQGEFSRIPAIYSTD 253
             |:||:|::|.::.||.....|:.         .|..|:      .||||.:            :
 Worm   333 GRRSDIWSLGVIIIEMYTGVYPWSIDGEHPITVPRILDENPPNFTTSEKIDE------------N 385

  Fly   254 LQEIIAFMLAVDHEQRPGIEVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEED 318
            |.::...||. ...:||....::              :.|||.:|.|:           |||:.|
 Worm   386 LIKMAKLMLQ-SVAKRPYASTLL--------------ELPILQESSEN-----------EDEDSD 424

  Fly   319  318
             Worm   425  424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 68/286 (24%)
S_TKc 19..281 CDD:214567 68/286 (24%)
mekk-3NP_492629.1 S_TKc 157..412 CDD:214567 69/300 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157637
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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