DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and herc1

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_017947876.1 Gene:herc1 / 100493988 XenbaseID:XB-GENE-1002062 Length:4854 Species:Xenopus tropicalis


Alignment Length:431 Identity:92/431 - (21%)
Similarity:153/431 - (35%) Gaps:146/431 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 EDEEEDGVHPELSSTMFTEQYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQ-LSD 376
            |.||:..:.|...:.:.||..                .|.|.:|       ..|.|  ||: .|.
 Frog  2411 ESEEKGDIEPRGDADIATEVQ----------------ITEDAKS-------NNIVP--KLENESG 2450

  Fly   377 PSLYESIRREERAEERQVEL----AEERRRKKDQEQQKRDQELLKEAPSSPRALTQNIFD----E 433
            |.|         .|..||::    .:.:|:..|...:..|     .|.|..||:..:..:    :
 Frog  2451 PPL---------GETAQVDIQHHSTDGKRKSHDHIPRSHD-----VAQSEIRAVQLSYINLGAMK 2501

  Fly   434 VLKTRLHAIRAQESLLQQKL-----------------EELQTR--------------------EQ 461
            .|.|.|...:..|.||..|:                 |:::.|                    ::
 Frog  2502 SLGTLLSCSKYAELLLIPKVLADNGHNSDCASSPVVHEDVEMRAALQFLMRHMVKRAVMRSPIKR 2566

  Fly   462 ELQLAE-QRVQT----------LERQ----MQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDD 511
            .|.||: :|.|.          ||.|    ::::|.||.:.|...:| ...|:.....|.|....
 Frog  2567 ALGLADLERAQAMIYKLVVHGLLEEQFGSRLRQELEQQAEETDQAQQ-AQTPVTTSPSASSTTSF 2630

  Fly   512 TYCTIELNETSPTVAKLNLATLPAPKS-----LNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVN 571
            ...::| :.|:.|....:..|:||.:|     |:.||       |.|.:|....:.|  .:.|..
 Frog  2631 MSSSLE-DTTTATTPVTDTETVPASESPGVMPLSLLR-------QMFSSYPTTTILP--TRRAQT 2685

  Fly   572 PPPTGVPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQA-AATRVQRP 635
            ||.|.:|   :..:::.|       ||:|:.|         ..|:.....|:.|.: .::|:...
 Frog  2686 PPITSLP---TSPTDEVG-------RRQSLTS---------PDSQPTRHTNRAALSDPSSRLSTS 2731

  Fly   636 PLAVKPPITQEQPAEVPPVANL-WTKEQKKQAFELLAAMNA 675
            |    ||     ||.|.|:..: ::..|.|:|.|...|..|
 Frog  2732 P----PP-----PAVVVPLLEMGFSIRQIKKAMEATGAREA 2763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857
S_TKc 19..281 CDD:214567
herc1XP_017947876.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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