DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and LOC100486333

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_002936837.2 Gene:LOC100486333 / 100486333 -ID:- Length:494 Species:Xenopus tropicalis


Alignment Length:481 Identity:127/481 - (26%)
Similarity:223/481 - (46%) Gaps:60/481 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAK-CDALVSEISVLRQLQHPNIV 79
            ::.||.:..:|.|:....:.:|:|.|.:.:|.|.:..||....: .::::.|.::|.:|.||::|
 Frog     1 MEKYEKILKIGRGATAEVFLMRNKETKKNYAVKKIKIDESKRLRNKESILQEATILGKLVHPHVV 65

  Fly    80 QYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQR----FEEPYIWRVLFQLCRALQVCHN 140
            ..:..:.:.|.:.::||.:.|.||.|...:      :||    |.|..|.....||..|:|..|:
 Frog    66 ACHECICDEEDEHIFIVQDYCDGGTLDDHI------KQRNGALFPEDTIMDWFIQLTMAVQYIHS 124

  Fly   141 KIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDR 205
            .    .|||||||.:|:||...|..:|||||::::|......|::.||||:|:||||.:...|..
 Frog   125 M----KILHRDIKTSNVFLTKKGMVRLGDFGISKVLSSTMDMASTCVGTPYYLSPELCQDIPYSS 185

  Fly   206 KSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRP 270
            |||:||:|||:||||||:|.|.......|..||.:||:..|...||.||.:::..:|....|.||
 Frog   186 KSDIWALGCLLYEMCALQPAFNAANLISLFFKIVKGEYPPISDCYSIDLHKLVKTILDKCPESRP 250

  Fly   271 GIEVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFED--EEEDGVHPE--LSSTMFTE 331
            ....|:       |:|.:..:..:.:...|        ::|:..  .:::...|:  .|.|....
 Frog   251 SASCIL-------NLSFVQEQLKLFIQKHE--------SQLYRQTASKKENTSPQENRSKTSVGH 300

  Fly   332 QYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKL-QLSDPSLYESIRREERAEERQVE 395
            ..:..:.: :.:.:..|.:.||:       .|.:::..::| ...|.|.|.    |:..:...|.
 Frog   301 HDTAKDNF-RPKSAPPGPYKPDV-------TKCELWDQEELSSTGDKSEYS----EDFDDNESVS 353

  Fly   396 LAEERRRKKD----------QEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQ 450
            ..||....::          :|....|.|...|.|.....:..|..:.|:.   ||..|.|....
 Frog   354 SVEENLEGENGTPCENEDIPEEIDLVDDEGESEYPDDFEEVEGNTLEMVVS---HARSAMEVEAD 415

  Fly   451 QKLEELQTREQELQLAEQRVQTLERQ 476
            .:..:....:|:.|.....::|:.:|
 Frog   416 NETFQDDNGDQDNQSLSATLKTIRQQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 93/267 (35%)
S_TKc 19..281 CDD:214567 93/266 (35%)
LOC100486333XP_002936837.2 STKc_Nek 3..261 CDD:270855 95/274 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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