DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and LOC100328980

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001164656.1 Gene:LOC100328980 / 100328980 -ID:- Length:442 Species:Xenopus tropicalis


Alignment Length:489 Identity:183/489 - (37%)
Similarity:259/489 - (52%) Gaps:77/489 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::|||||..:|:||:|.|.|:|.:|.|:|..||.::|..:.||:...||||:::||:|:|||||:
 Frog     5 VEDYEVLYTIGSGSYGKCQKIRRRSDGKLLVWKELDYGTMTEAEKQMLVSEVNLLRELKHPNIVR 69

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNG 145
            ||..:::|...::|||||.|.|||||.::.:...:||..||.:|.|:..||..||:.||.:...|
 Frog    70 YYDRIIDRTNTTLYIVMEYCEGGDLASLIAKCTKERQYLEEDFILRIFSQLALALKDCHKRSDGG 134

  Fly   146 -TILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             |:||||:|||||||||..|.|||||||||:|..|.|||.:|||||:|||||.:....|:.|||:
 Frog   135 HTVLHRDLKPANIFLDAKNNVKLGDFGLARILHHDSSFAKTFVGTPYYMSPEQMNRMSYNEKSDI 199

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEV 274
            |::|||:||:|||.|||......:|:|||.:|.|.|||..||.:|.::|..||.:....||.||.
 Frog   200 WSLGCLLYELCALSPPFTAYNQKELAEKIREGRFRRIPYRYSEELNQVITNMLHLKDYLRPSIEE 264

  Fly   275 IIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGY 339
            |::|.|:                           |.|..:|::.           ||:...... 
 Frog   265 ILQHHLL---------------------------AELVREEQKK-----------TEKKVLRAA- 290

  Fly   340 GQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRKK 404
            .|.|||:......:||           ...::|...:.:|.|   ||||.|:|:.||....|..:
 Frog   291 EQERLSMPDPVPSELR-----------LKEQQLHTRERALRE---REERLEQRERELCVRERMAE 341

  Fly   405 DQ----EQQKRDQELLKEA----------------PSSPRALTQNIFDEVLKTRLHAIRAQESLL 449
            |:    |...:...|:||.                .||.|:.....|....|......|.:|   
 Frog   342 DKLARAETLVKSFNLMKEQHLFQAALENGKDAYVDSSSTRSRRHVHFGSNSKENSSTDRYRE--- 403

  Fly   450 QQKLEELQTREQELQLAEQRVQTLERQMQEKLLQ 483
            |:|..:||.|.|...:..:.:..|||..|.|..|
 Frog   404 QEKCSDLQKRLQAANIRAKALSELERNYQLKSRQ 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 135/263 (51%)
S_TKc 19..281 CDD:214567 134/262 (51%)
LOC100328980NP_001164656.1 STKc_Nek2 7..271 CDD:270857 135/263 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 284 1.000 Domainoid score I1608
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2729
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 1 1.000 - - oto105380
Panther 1 1.100 - - LDO PTHR43671
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4876
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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