DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and nek1

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_012827049.2 Gene:nek1 / 100036653 XenbaseID:XB-GENE-983162 Length:1320 Species:Xenopus tropicalis


Alignment Length:747 Identity:185/747 - (24%)
Similarity:311/747 - (41%) Gaps:162/747 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            :..|..::.:|.||||....|:.|..|:.:..|.:...::...:.:....|::||..::||||||
 Frog     1 MNKYVRVSKIGEGSFGKAILVKSKDDGKQYVIKEIGISKMSNKEREESRREVAVLANMKHPNIVQ 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQR-QRFEEPYIWRVLFQLCRALQVCHNKIPN 144
            |....  .|:..:||||:.|.||||   .:|..||: ..|.|..|.....|||.||:..|::   
 Frog    66 YQESF--EESGCLYIVMDYCEGGDL---FKRINSQKGVLFSEDQILDWFVQLCLALKHVHDR--- 122

  Fly   145 GTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             .|||||||..||||...|..:|||||:||:|......|.:.:|||:|:|||:.:.|.|:.|||:
 Frog   123 -KILHRDIKSQNIFLTKGGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDI 186

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEV 274
            ||:||::||||.|:..|.......|..||.:|.:..:...||.||:.:::.:...:...||.:..
 Frog   187 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSVHYSYDLRNLLSMLFKRNPRDRPSVNS 251

  Fly   275 IIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGY 339
            |:..|.:.|.|.    ||                               ||.....|::..    
 Frog   252 ILEKPFIYRRIE----KF-------------------------------LSPQHIAEEFGL---- 277

  Fly   340 GQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEER---- 400
                    |.|....:..:..:|.::..||:.:..|.|:  ..|.:.  |.:..|.|..::    
 Frog   278 --------GAFVNHPKPGIQAAAAKRPTPAQVVPASPPA--HKITKP--AAKYGVPLTTKKSSDA 330

  Fly   401 -RRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQTREQELQ 464
             ::..|::.|.|.    ::||:.|.... |..||..|......:.:...::|..:|.:.|||...
 Frog   331 AKKHHDKKPQIRH----RQAPAVPLKKV-NPVDERRKMFEDGAKKKRMDVRQLEKEKRQREQFNL 390

  Fly   465 LAEQRVQTLERQMQEKLLQQEKH----------TCSCRQP-------IAPPIPPRKPAKSHHDDT 512
            |..::::.||::..|::.:..:.          :...:.|       :|||....:....|:...
 Frog   391 LRAEQMRRLEKERLERINRAREQGWRNVISSGGSGDIKAPYFGGGGGVAPPQGMGRGPYEHYHSI 455

  Fly   513 YCTIELNETSPTVAKLNLATLPAP-KSLNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTG 576
            :..::..:.:...|......|.|. ::.:|..:|. |.|::      ||.|     .|.:|.|.|
 Frog   456 FDQMQQQKENIKAAVEKEVKLKADIQNPDTYSRVP-KHPEQ------ENCP-----SAHSPFPDG 508

  Fly   577 VPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRVQRPPLAVKP 641
                             .:.||:               .|.|..|:.  ||...::|....|.|.
 Frog   509 -----------------DAVRRE---------------LKRLQEVHN--QAIGNKIQGHVSAEKA 539

  Fly   642 PITQEQPAEVPPVANLWTKEQKKQAFELLAA----MNAAEREAS--GGGVVGSGPGGARRQ---- 696
            ...:|            ..::|.:|.:..|.    |:|....|:  ||....:|.|.||.:    
 Frog   540 RQVEE------------FLQRKHEAMQNKARAEGHMDAVHNLAAICGGRPNSAGGGKARNREEKE 592

  Fly   697 ---HLRQSVRERNSTLQRNRMRRSLVVATGHQ 725
               .||| :|.:|.. :|.:::..|..|.|.:
 Frog   593 YLARLRQ-IRLQNFN-ERQQIKAKLRGAKGDE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 97/263 (37%)
S_TKc 19..281 CDD:214567 97/262 (37%)
nek1XP_012827049.2 STKc_Nek1 3..258 CDD:270858 97/263 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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