DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nek2 and nek1

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_012827049.2 Gene:nek1 / 100036653 XenbaseID:XB-GENE-983162 Length:1320 Species:Xenopus tropicalis


Alignment Length:747 Identity:185/747 - (24%)
Similarity:311/747 - (41%) Gaps:162/747 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            :..|..::.:|.||||....|:.|..|:.:..|.:...::...:.:....|::||..::||||||
 Frog     1 MNKYVRVSKIGEGSFGKAILVKSKDDGKQYVIKEIGISKMSNKEREESRREVAVLANMKHPNIVQ 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQR-QRFEEPYIWRVLFQLCRALQVCHNKIPN 144
            |....  .|:..:||||:.|.||||   .:|..||: ..|.|..|.....|||.||:..|::   
 Frog    66 YQESF--EESGCLYIVMDYCEGGDL---FKRINSQKGVLFSEDQILDWFVQLCLALKHVHDR--- 122

  Fly   145 GTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDV 209
             .|||||||..||||...|..:|||||:||:|......|.:.:|||:|:|||:.:.|.|:.|||:
 Frog   123 -KILHRDIKSQNIFLTKGGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDI 186

  Fly   210 WAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEV 274
            ||:||::||||.|:..|.......|..||.:|.:..:...||.||:.:::.:...:...||.:..
 Frog   187 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSVHYSYDLRNLLSMLFKRNPRDRPSVNS 251

  Fly   275 IIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGY 339
            |:..|.:.|.|.    ||                               ||.....|::..    
 Frog   252 ILEKPFIYRRIE----KF-------------------------------LSPQHIAEEFGL---- 277

  Fly   340 GQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEER---- 400
                    |.|....:..:..:|.::..||:.:..|.|:  ..|.:.  |.:..|.|..::    
 Frog   278 --------GAFVNHPKPGIQAAAAKRPTPAQVVPASPPA--HKITKP--AAKYGVPLTTKKSSDA 330

  Fly   401 -RRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQTREQELQ 464
             ::..|::.|.|.    ::||:.|.... |..||..|......:.:...::|..:|.:.|||...
 Frog   331 AKKHHDKKPQIRH----RQAPAVPLKKV-NPVDERRKMFEDGAKKKRMDVRQLEKEKRQREQFNL 390

  Fly   465 LAEQRVQTLERQMQEKLLQQEKH----------TCSCRQP-------IAPPIPPRKPAKSHHDDT 512
            |..::::.||::..|::.:..:.          :...:.|       :|||....:....|:...
 Frog   391 LRAEQMRRLEKERLERINRAREQGWRNVISSGGSGDIKAPYFGGGGGVAPPQGMGRGPYEHYHSI 455

  Fly   513 YCTIELNETSPTVAKLNLATLPAP-KSLNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTG 576
            :..::..:.:...|......|.|. ::.:|..:|. |.|::      ||.|     .|.:|.|.|
 Frog   456 FDQMQQQKENIKAAVEKEVKLKADIQNPDTYSRVP-KHPEQ------ENCP-----SAHSPFPDG 508

  Fly   577 VPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRVQRPPLAVKP 641
                             .:.||:               .|.|..|:.  ||...::|....|.|.
 Frog   509 -----------------DAVRRE---------------LKRLQEVHN--QAIGNKIQGHVSAEKA 539

  Fly   642 PITQEQPAEVPPVANLWTKEQKKQAFELLAA----MNAAEREAS--GGGVVGSGPGGARRQ---- 696
            ...:|            ..::|.:|.:..|.    |:|....|:  ||....:|.|.||.:    
 Frog   540 RQVEE------------FLQRKHEAMQNKARAEGHMDAVHNLAAICGGRPNSAGGGKARNREEKE 592

  Fly   697 ---HLRQSVRERNSTLQRNRMRRSLVVATGHQ 725
               .||| :|.:|.. :|.:::..|..|.|.:
 Frog   593 YLARLRQ-IRLQNFN-ERQQIKAKLRGAKGDE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 97/263 (37%)
nek1XP_012827049.2 STKc_Nek1 3..258 CDD:270858 97/263 (37%)

Return to query results.
Submit another query.