DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grid1a

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_021323097.1 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:750 Identity:142/750 - (18%)
Similarity:231/750 - (30%) Gaps:276/750 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LRVFIEDFYQRIAPAFIVVLSCRRPSPMNFYRNIMQ-------------LLYESV---------- 73
            |.|.::...:.:...|..:.|..|...:|.||:.::             .::::|          
Zfish   190 LDVSLQQVDRNVTKVFSTLFSTMRMEELNRYRDTLRRAILLLSPRTAQVFIHQAVETNLASKDSH 254

  Fly    74 ---------DTMIVQLVLVELGRP---RRI----------AGPRTHNL--LLVDSLDALL-DIEI 113
                     ||.|::||...|||.   |:|          .....|.:  ||.|..:..| .:|:
Zfish   255 WVYANEEVSDTEIMELVHSALGRMTVIRQIFPLWRDTNIRCMRNNHRISSLLCDPQEGYLQSLEV 319

  Fly   114 ---HTYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLINCNVMTQS----SGGQVLLHT 171
               :.|.:....:..::..|:.|.              | |.:.:.|.|.:|    :||..:|.|
Zfish   320 SSLYLYDSVLMLANAFYRKLEDRK--------------W-HSMASLNCMRKSTKPWNGGWSMLDT 369

  Fly   172 YFPYAPGQCNDSQPTRINMFLG---------------------------------ESWKHRDYFP 203
            .           |..||:...|                                 .:|.......
Zfish   370 I-----------QKGRISGLTGLMDFRSNGANSHVQFEILGTSYSETFGKDVKRLATWDSDRGLN 423

  Fly   204 SKL------HNLNGCPLIVLARKVSPFLDLDE---GQ-RELRGLEGRLLQELSRRMNFSIQFSGL 258
            ..|      |.:.|..|.|:.....||:.:.|   || :..:|....:|..|::.:.|..:...:
Zfish   424 GSLRENRADHGMQGITLKVVTLLEEPFVMVAENILGQPKRYKGFSIDVLDALAKILGFKYEMYQV 488

  Fly   259 QDQL--KNRTTWTEKQLLQKLVQER--IAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLLNA 319
            .|..  ..:|..:...::.:|:.:|  :|..||....:|    .|:......|.:..||.|:...
Zfish   489 ADAKYGSPQTNGSWNGMIGELIGKRADVAISAITITPER----ENVVDFSKRYLDYSVGILMTKT 549

  Fly   320 HNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXRGAGDR-----------------LALV 365
            ..  .|.|:|.  ||....|.|:..:...:..:..|. |....|                 .:.:
Zfish   550 EE--RLNIFSLLAPFDLAVWACIAAAIPVVGVMVFLLRRVQSVRSQNPPGPHQPASVTTSFQSAI 612

  Fly   366 LAVYAA-----------SLGLPIDPPERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRL 419
            ..||.|           |:          :|::...||.:|.|||.|.|:|.|...|........
Zfish   613 WIVYGAFVQQGGESFMSSM----------ALRIAMGSWWLFTLIVCSSYTANLAAYLTVSRMDNA 667

  Fly   420 PGNLQDLT------HG--------DYAAVMGRTTLQDLREVPSL---------QDLLGLKSVIVT 461
            ....|||:      :|        :|..|.|...|:.......|         ||    .||...
Zfish   668 IRTFQDLSKQSEINYGTVRESAVFEYFRVKGTNPLEQDSTFAELWRTINKNQGQD----NSVTSP 728

  Fly   462 SEREEEVLR-----------------TLDRCTL-REGAGSHPLFFGLISQ----------DALLH 498
            :|...:|.|                 |.|.||| ..|.|.....:||..|          ..:|.
Zfish   729 AEGIRKVKRDPYAFLWDMAVLEYAALTDDDCTLVVTGNGMSSKGYGLALQHGSPYRDLFSQKILD 793

  Fly   499 LTQRGHRAGAYHIIPQDVLEQQL-----AIYLQKHSHLASHLDHLVMSIRSVGLVHHWAGQMASE 558
            |.::|         ..|:|:|:.     ...|.||:...:.    ..::|    :|.:||...  
Zfish   794 LQEKG---------DLDILKQKWWPRKGRCDLDKHAEPQTE----GRALR----LHSFAGVFC-- 839

  Fly   559 RYFRSRFLYREKRIRQPDLWAVYILTAGLYLLSLV 593
                                   ||.|||.|..||
Zfish   840 -----------------------ILAAGLLLACLV 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grid1aXP_021323097.1 Periplasmic_Binding_Protein_Type_1 25..424 CDD:324556 42/259 (16%)
PBP2_iGluR_delta_1 437..809 CDD:270448 83/400 (21%)
DNA_pol3_gamma3 <915..1044 CDD:331207
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591141
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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