DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grik5-like.1

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001072565.1 Gene:grik5-like.1 / 780020 XenbaseID:XB-GENE-5860197 Length:479 Species:Xenopus tropicalis


Alignment Length:502 Identity:96/502 - (19%)
Similarity:173/502 - (34%) Gaps:154/502 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 CNDSQPTRINMFLGESWK--HRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRGLEG--- 239
            |.|:         |||..  |::...||...|.  .|.|......||     ..:...|:||   
 Frog    18 CTDA---------GESKGSIHKEKERSKRQALK--HLTVTTIMEQPF-----SMKTESGMEGFCI 66

  Fly   240 RLLQELSRRMNFSIQFS-------GLQDQLKNRTTWTEK--QLLQKLVQERIAHLAIGYVRKRIQ 295
            .||.||::.:.|:....       |.:||..|   |...  ::|:|.....:|.|.|...|:|  
 Frog    67 DLLSELAQSLGFNYTIKEVKDGRYGAKDQDGN---WNGMVGEVLRKEADLAVAPLTITGARER-- 126

  Fly   296 YATNLTPVFPHYSNRVVGCLLLNAHNLT-SLEIWSF--PFQALTWICLVFSFLSIS-CLALLHXR 356
               .|....|.....:  .:||...::: :..::.|  ||...|||.::.:::..| ||.|:   
 Frog   127 ---ELAFTKPFMQTGI--SILLRKDDVSENSYLFGFLTPFSKETWIGILVAYVVTSLCLFLV--- 183

  Fly   357 GAGDRL-------------------ALVLAVYAASLGLPIDPPERPSLQLLFASWLIFGLIVRSM 402
               .||                   :|...|.|.:|......|:..|.:::...|.||.:::.:.
 Frog   184 ---GRLSPCEWTELSTEQNNFNFLNSLWFGVGAFTLQGAEPHPKSVSARIIAVIWWIFSIVLVAA 245

  Fly   403 YSALLFFILRYHLHQRLPGNLQDLTHGDYAAVMGRTTLQDLREVPSLQDLLGLKSVIVTSEREEE 467
            |.|                        .:||.:...::| ...:.:.:||:.             
 Frog   246 YIA------------------------SFAAFLNSDSMQ-TTNIQTFEDLVN------------- 272

  Fly   468 VLRTLDRCTLREGA-------GSHPLFFGLIS-----QDALLHLT----QRGHRAGAYHIIPQDV 516
             .|||:..|:...:       ..:|.:..:..     :|.||..:    .|..:...|..:.:.|
 Frog   273 -QRTLEFGTINSSSTFQFFKNSKNPTYRMIYEYMDKRKDELLVKSFAEGVRRVKESNYAFLGESV 336

  Fly   517 LEQQLAIYLQKHSHL--------------ASHLDHLVMSIRSVGLVHHWAGQMASERYFRSRFLY 567
            ::.   |.:.||..|              |:.||..::...||.::..  .:..:..|.|.::..
 Frog   337 MQD---IMVAKHCDLVRAPQIIAGRGYGIAASLDSPLIKPLSVAILEQ--TESGNIEYLRKKWWD 396

  Fly   568 REKRIRQPDLW----------AVYILTAGLYLLSLVVFICELLASRR 604
            ....:::...|          ...||..|| .|.::..:.||:...|
 Frog   397 NTCNMKRSAGWNPVQPHTLGGIFLILGIGL-ALGVIAALVELVLKAR 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grik5-like.1NP_001072565.1 PBP2_iGluR_non_NMDA_like 41..396 CDD:270403 78/421 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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