DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grin3ba

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_021323058.1 Gene:grin3ba / 566411 ZFINID:ZDB-GENE-070912-354 Length:1118 Species:Danio rerio


Alignment Length:551 Identity:107/551 - (19%)
Similarity:181/551 - (32%) Gaps:179/551 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PMNFY-RNIMQLLYESV--------DTMIVQLVLVELGRPRR----IAGPRTHNLLLVDSLDALL 109
            |:||| |:.:||:..:|        |..::|.::....:|.:    .:|......|...|...|.
Zfish   311 PLNFYIRDTLQLIGRAVYAATMVRPDLALIQNMVNCFDKPNKHELPSSGQYLARFLSNTSFTGLT 375

  Fly   110 -DIEIHTYTAQSDTSEYYFIFLQQRDAL---------------IPHDMQGVFAYCWRHQLIN--- 155
             .:.:....::..||:.:.|:..|||.|               :..:.||::....:||..:   
Zfish   376 GPVRVERSFSRVLTSQRFHIWSLQRDPLGQPSWVTVASWQSGRLELEEQGLWPGVTQHQREDGPG 440

  Fly   156 --------CNVMTQSSGGQVLLHTYFPYA-------PGQCNDSQ-----PTRINMFLGESWKHRD 200
                    ..:....|..:|:.....|:.       .|||...|     .|..:..|.:.::   
Zfish   441 IRLGGRWQAGLPVAGSRLRVVTLVEHPFVFTREVDEEGQCPAGQLCLDPQTNNSEVLNQLFR--- 502

  Fly   201 YFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRGLEGRLLQELSRRMNFSI------------ 253
                :|...|...|....||......:|            ||::|:..|:|..            
Zfish   503 ----ELEQTNSSSLPTDMRKCCYGYCID------------LLEKLAEDMHFEFDLYIVGDGKYGA 551

  Fly   254 ----QFSGLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGC 314
                ::|||..           .||..:....:...:|...|.|:...|:     |.:|.. :|.
Zfish   552 WKGGRWSGLVG-----------DLLSGVADMAVTSFSINSARSRVIDFTS-----PFFSTS-LGI 599

  Fly   315 LLLNAHNLTSLEIWSFPFQALTWICLVFSFLSISCLALL------------HXRGAGDRL----- 362
            |:.:......:..:.:|.....|:. :|..|.|:.|.:.            | |   :|:     
Zfish   600 LVRSKDTAAPIGAFMWPLHWSMWVG-IFVALHITALFITLYEWNSPFGMTPHGR---NRIRVFSY 660

  Fly   363 --ALVLAVYAASLGLPI--DPPERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNL 423
              ||.|. ||...|..:  ..|:..:.:.|...|.||.|:|.|.|:|.|                
Zfish   661 SSALNLC-YAILFGRTVASKTPKCWTGRFLMNLWAIFCLLVLSSYTANL---------------- 708

  Fly   424 QDLTHGDYAAVM-GRTTLQDLREVPSLQDL------LGLKSVIVTSEREE-----------EVLR 470
                    |||| |..|.:   ||..:.|:      ||.:...|.....|           |.:|
Zfish   709 --------AAVMVGEKTFE---EVSGIHDVKLHHPSLGFRFGTVRESSAEDYVKKSFPEMHEYMR 762

  Fly   471 TLDRCTLREGAGS----HPLFFGLISQDALL 497
            ..::.|..:|..:    .|.....|...|||
Zfish   763 RFNKPTTPDGVSTLKTDPPQLDAFIMDKALL 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grin3baXP_021323058.1 Periplasmic_Binding_Protein_Type_1 26..428 CDD:324556 24/116 (21%)
PBP2_iGluR_NMDA_Nr3 457..852 CDD:270438 80/405 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591700
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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