DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grik1b

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:629 Identity:121/629 - (19%)
Similarity:220/629 - (34%) Gaps:163/629 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QRIAPAFIVVLSCRRPSPMNFYRNIMQLLYESVDTMIVQLVLVELGRPRRIAGPRTHNLLLVDSL 105
            ||.:...:..|.|.|..|..|....:.:..|:....:...:::.                ..|.|
Zfish   363 QRASQITVSSLQCHRHKPWRFGSRFISMFKEAQWNGLTGQIIIN----------------KTDGL 411

  Fly   106 DALLDIEIHTYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLINCNVMTQSSGGQVLLH 170
            ....|::|              |.|:: |.|......|.|...|:    ...|...::|..:   
Zfish   412 RKDFDLDI--------------ISLKE-DGLEKPLESGRFNKVWK----KIGVWNSNTGLNL--- 454

  Fly   171 TYFPYAPGQCNDSQPTRINMFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELR 235
                      .||...: |..:.:|..:|             .|||.....:|::...:..:.|.
Zfish   455 ----------TDSNKDK-NTNVTDSMANR-------------TLIVTTILENPYVMYKKSDKPLY 495

  Fly   236 G---LEG---RLLQELSRRMNFSIQFS-------GLQDQLKNRTTWTEKQLLQKLVQERIAHLAI 287
            |   .||   .||:|||..:.||.:..       |.|:. |.......::|:..:....:|.|.|
Zfish   496 GNDRFEGYCLDLLKELSNILGFSYEVKLVTDGKYGAQND-KGEWNGMVRELIDHVADLAVAPLTI 559

  Fly   288 GYVRKRIQYATNLTPVFPHYSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISC 349
            .|||:::   .:.:..|     ..:| .:|.:..|.|:..::||  |.....|:.::.:.|.:||
Zfish   560 TYVREKV---IDFSKPF-----MTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSC 616

  Fly   350 LALLHXR-----------------GAGDRLALVLAVYAASLGLPIDP-----PERPSLQLLFASW 392
            :..:. |                 ...:...|:.:|: ..:|..:..     |:..|.:::...|
Zfish   617 VLFVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVW-FGVGALMQQGSELMPKALSTRIVGGIW 680

  Fly   393 LIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDL---THGDYAAVMGRTTLQDLR--EVPSLQDL 452
            ..|.||:.|.|:|.|...|..........:..||   |..:|.||...:|:...:  ::.:.:.:
Zfish   681 WFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKM 745

  Fly   453 LGLKS-----VIVTSERE--EEVLRTLDRCTLREGAGSHPLFFGLISQDALLHLTQ-------RG 503
            ....|     .:|.:.||  :.|| |.|...|.|...     ...||| ...:|||       :|
Zfish   746 WAFMSSRKNTALVKNNREGIQRVL-TTDYALLMESTS-----IEYISQ-RNCNLTQIGGLIDSKG 803

  Fly   504 HRAGAYHIIPQDVLEQQLAIYLQKHSHLASHLDHLVMSIRSVGLVHHWAGQMASERYFRSRFLYR 568
            :..|.....|          |..|       :...::.::..|.:|     |..|:::|......
Zfish   804 YGVGTPIGSP----------YRDK-------VTIAILQLQEEGKLH-----MMKEKWWRGNGCPE 846

  Fly   569 E-----KRIRQPDLWAVYILTAGLYLLSLVVFICELLASRRAGL 607
            |     ..:...::..::|:.|...:||:.|.|.|.:...|..|
Zfish   847 EDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNL 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 21/139 (15%)
ANF_receptor 80..423 CDD:279440 13/89 (15%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 85/420 (20%)
Lig_chan 602..871 CDD:278489 55/298 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591593
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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