DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grid1b

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:747 Identity:149/747 - (19%)
Similarity:241/747 - (32%) Gaps:266/747 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QALRVFIEDFYQRIAPAFIVVLSCRRPSPMNFYRNIMQ-------------LLYESV-------- 73
            |.|.|.::...:.|:..|..:.:..|...:|.||:.::             .::::|        
Zfish   188 QGLDVSLQRVDRNISGVFSSLFTSMRTEELNRYRDTLRRAILLLSPRGAQVFIHQAVETNLASKD 252

  Fly    74 -----------DTMIVQLVLVELGR---PRRI----------AGPRTHNL--LLVDSLDALL-DI 111
                       ||.|::|....|||   .|:|          ....:|.:  ||.|..:..| .:
Zfish   253 SHWVFVNEEISDTEILELAHSSLGRMTVVRQIFPLWRDSSVSCMRNSHRISSLLCDPQEGYLQSL 317

  Fly   112 EI---HTYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLINCNVMTQS----SGGQVLL 169
            |:   :.|.:....:..::..|:.|.              | |.:.:.|.:.:|    :||..:|
Zfish   318 EVSNLYLYDSVLMLANAFYRKLEDRK--------------W-HSMASLNCIRKSTKPWNGGWSML 367

  Fly   170 HTYFPYAPGQC-----------NDSQP--------TRINMFLGESWKHRDYFPSKLHNLN----- 210
            .|   ...|:.           |.|..        |..:...|:..|....:.| :|.||     
Zfish   368 ET---IQKGRITGLTGIMDFMENGSNSHVQFEILGTSFSETFGKDIKRLATWDS-VHGLNGSLKE 428

  Fly   211 --------GCPLIVLARKVSPFLDLDE---GQ-RELRGLEGRLLQELSRRMNFSIQFSGLQD--- 260
                    |..:.|:.....||:.:.|   || :..:|....:|:.|::.:.|......:.|   
Zfish   429 SRIENGMQGVTVKVVTLLEDPFVMVAENILGQPKRYKGFSIDVLEALAKILGFKYDIYQVADSKY 493

  Fly   261 --QLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQYATNLTP-------VFPHYSNRVVGCLL 316
              ||.| .:|  ..::.:|:.:| |.||:.        |..:||       ....|.:..||  :
Zfish   494 GSQLSN-GSW--NGMIGELINKR-ADLAVS--------AITITPERENVVDFSKRYMDYSVG--I 544

  Fly   317 LNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALL----------------HXRGAGDRL- 362
            |:......:.|:|.  ||....|.|:..:...:..|..|                | ....:.| 
Zfish   545 LHRKPEEKINIFSLFAPFDLAVWACIAAAIPVVGVLIFLLTRMQMLRSQNPPGAHHASSMSNSLH 609

  Fly   363 ALVLAVYAASLGLPIDP-PERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDL 426
            :.:..||.|.:....|. ....:|:::..||.:|.|||.|.|:|.|...|............|||
Zfish   610 SAIWIVYGAFVQQGGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDL 674

  Fly   427 ------THG--------DYAAVMGRTTLQDLREVPSL---------QDLLGLKSVIVTSE--RE- 465
                  .:|        ||....|...|:.......|         ||.    ||...||  |: 
Zfish   675 ARQMDFAYGTVRDSAVYDYFKAKGTNPLEQDSTYAELWRTISKNNGQDF----SVSSPSEGIRKA 735

  Fly   466 --------------EEVLRTLDRCTLREGAGSHPLFFGLISQDALLHLTQRGHRAGAYH------ 510
                          |....|.|.||:.....|               ::.:|:.....|      
Zfish   736 KKGPYAFLWDMAVVEYAALTDDDCTITVSGNS---------------MSSKGYGIAMQHGSPYRD 785

  Fly   511 IIPQDVLEQQ----LAIYLQK----------HSHLASHLDHLVMSIRSVGLVHHWAGQMASERYF 561
            :|.|.:||.|    |.:..||          :||..:..|.     ||:.| |.:||...     
Zfish   786 LISQKILELQEKGDLDVLKQKWWPRTGRCDLNSHSNAQPDG-----RSLKL-HSFAGVFC----- 839

  Fly   562 RSRFLYREKRIRQPDLWAVYILTAGLYLLSLV 593
                                ||.|||.|..||
Zfish   840 --------------------ILAAGLLLACLV 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..424 CDD:107387 45/254 (18%)
ANF_receptor 36..400 CDD:279440 39/229 (17%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:304360 86/404 (21%)
Lig_chan 565..840 CDD:278489 63/324 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591134
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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