DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grik4

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_021322087.1 Gene:grik4 / 556582 ZFINID:ZDB-GENE-070821-5 Length:965 Species:Danio rerio


Alignment Length:712 Identity:142/712 - (19%)
Similarity:234/712 - (32%) Gaps:257/712 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLLNFESMKYIGAQTQAASINHHVAQALRVFIEDFYQRIAPAFIVVLSCRRP------------S 57
            |||..:.:    |..:...:...|......|.:||          |||..|.            :
Zfish   251 SLLRLDDL----ADQRVNIVGFSVFNRTHPFFQDF----------VLSLNRSWQENCDHAPFAGT 301

  Fly    58 PMNFYRNIMQLLYESVDTMIVQLVLVELGRPRRIA--------------GPRTHNLLLVDSLDAL 108
            |::     ..||:::|.|::.  .:.||.|.:.:.              |....|.|.:..|:.|
Zfish   302 PLS-----SALLFDAVHTVVA--AVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGL 359

  Fly   109 L-DIEIHTYTAQSDTSEYYFIFLQ-QRDALIPHDMQGVFAYCWRHQLINCNVMTQSSGGQVLLHT 171
            . .||   :.::...|.|....:| .||.|              .|:                  
Zfish   360 TGHIE---FNSKGQRSNYALRIMQNSRDGL--------------RQI------------------ 389

  Fly   172 YFPYAPGQCNDSQPTRINMFLGESWKHRDYFPSKLHNLN------GCPLIVLARKVSPFLDLDEG 230
                  ||.:..|        |.|.:.      ||.:||      ...|.:.....:|::.|...
Zfish   390 ------GQWHSEQ--------GLSMER------KLPSLNVTDTLFNTTLTITTILENPYVMLRAN 434

  Fly   231 QRELRG---LEG---RLLQELSRRMNFSIQFSGLQDQLKN----RTTWTEK--QLLQKLVQERIA 283
            .:||.|   .||   .:|:||:..:.|..:...:.|.:..    ..|||..  :|:.:.....:|
Zfish   435 HQELEGNDRYEGFCVDMLKELADILKFKYRIRLVGDGVYGVPGANGTWTGMVGELISRKADLAVA 499

  Fly   284 HLAIGYVRKRIQYATNLTPVFPHYSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFL 345
            .|.|...|:::   .:.:..|     ..:| .::...|.......:||  ||....|:.::.::|
Zfish   500 ALTITAEREKV---IDFSKPF-----MTLGISIMYRVHIGRRPGYFSFLDPFSPGVWLFMLLAYL 556

  Fly   346 SISCLALLHXR--------------GAGDRLALVLAVYAASLG----LPID---------PPERP 383
            ::||:..|..|              |   |.:|::..|  |||    .|:.         .|...
Zfish   557 AVSCVLFLVARLTPYEWYNPHPCLKG---RCSLLINQY--SLGNSFWFPVGGFMQQGSTIAPRAL 616

  Fly   384 SLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLP------GNLQDLTHGDYAAVMGRTTL-- 440
            |.:.:...|..|.||:.|.|:|.|...|..   ||:.      .:|.|.|..:|..:.|.:|:  
Zfish   617 STRCVSGVWWAFTLIIISSYTANLAAFLTV---QRMEVPIESVDDLADQTAIEYGTMHGGSTMTF 678

  Fly   441 -QDLREVPSLQDLLGL-----KSVIVTSEREEEVLRTLD------------------RCTLREGA 481
             |:.| ..:.|.:...     .||.|.| .||.:.|.|:                  .|.|.:..
Zfish   679 FQNSR-YQTYQRMWNFMYSKQPSVFVKS-TEEGIARVLNSNYAYLLESTMNEYYRQRNCNLTQIG 741

  Fly   482 GSHPLFFGLISQDALLHLTQRGHRAGAYHIIPQDVL---EQQLAIY-LQKHSHLASHLDHLVMSI 542
            |.               |..:|:..|    :|...:   |..|||. ||:.:.|..         
Zfish   742 GL---------------LDTKGYGIG----MPLGSVYRDEFDLAILRLQEENRLEI--------- 778

  Fly   543 RSVGLVHHW--AGQMASERYFRSRFLYREKRIRQPDLWAVYILTAGLYLLSLVVFICELLAS 602
                |...|  .|:...|...|::.|..|.             ..|::    ||.:|.||.:
Zfish   779 ----LKRKWWDGGKCPKEEDHRAKGLGMEN-------------IGGIF----VVLVCGLLVA 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grik4XP_021322087.1 Periplasmic_Binding_Protein_Type_1 26..400 CDD:324556 38/218 (17%)
PBP2_iGluR_kainate_KA1 425..785 CDD:270442 87/409 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590976
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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