DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7g and GluRIB

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:640 Identity:104/640 - (16%)
Similarity:179/640 - (27%) Gaps:317/640 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 SWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRGLEGRL-LQELSRRMNFSIQF--S 256
            :|:|.|                   |:|.:|    .:.|:.||.|.: ..:..||:|:::..  .
  Fly   419 AWEHGD-------------------KISRYL----RKVEIEGLTGDIKFNDDGRRVNYTLHVVEM 460

  Fly   257 GLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKR--IQYATNLTPVFP-------------- 305
            .:...:.....|.:...||.|..:        |||.|  :::..|.|.:..              
  Fly   461 TVNSAMVKVAEWNDDAGLQPLNAK--------YVRLRPHVEFEKNRTYIVTTVLEEPYIMLKQVA 517

  Fly   306 -----HYSNRVVG-CLLL---------------------------NAHN---------------- 321
                 |.:||..| |..|                           :||.                
  Fly   518 FGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADI 582

  Fly   322 -LTSLEI---------WSFPFQAL--------------------------TWICLVFSFLSISCL 350
             :.::.|         :|.||.:|                          .|:.::||::.:|.:
  Fly   583 AIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIV 647

  Fly   351 ALLHXRGAGDRLALV------------------LA-------VYAASLGLPIDPPERPSLQ---- 386
            .... |.:.....||                  ||       :..|.|..|..|| .|..|    
  Fly   648 LFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPP-TPGAQTAAG 711

  Fly   387 ------------------------------------------------------LLFASWLIFGL 397
                                                                  :..|||..|.|
  Fly   712 AAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTL 776

  Fly   398 IVRSMYSALLFFILRYHLHQRL------PGNLQDLTHGDYAAVMGRTTLQDLRE----------- 445
            |:.|.|:|.|...|..   :|:      |.:|...|...|..::..:|....|.           
  Fly   777 ILISSYTANLAAFLTV---ERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWE 838

  Fly   446 ---------VPSLQDLLGLKSV--------IVTSEREEEVLRTLDRC-TLREGAGSHPLFFGLIS 492
                     ||:..:  |:|.|        ::....:.|.:...:.| |::.|.......||:.:
  Fly   839 YMNSRKHVFVPTYDE--GIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIAT 901

  Fly   493 ------QD----ALLHLTQRGHRAGAYHIIPQDVLEQQLAIYLQKHSHLASHLD----HLVMSIR 543
                  :|    |:|.|.:.|           ::::.:...:.:| :..::|.|    |..:|:.
  Fly   902 PLGSALKDPINLAVLTLKENG-----------ELIKLRNKWWYEK-AECSTHKDGETSHSELSLS 954

  Fly   544 SVGLVHHWAGQMASERYFRSRFLYREKRIRQPDLWAVYILTAGLYLLSLVVFICE 598
            :|      ||                         ..|||..|| |:|:.|.|.|
  Fly   955 NV------AG-------------------------IFYILIGGL-LVSVFVAILE 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 14/81 (17%)
ANF_receptor 55..461 CDD:279440 13/64 (20%)
PBP2_iGluR_AMPA 497..938 CDD:270433 66/458 (14%)
Lig_chan 632..967 CDD:278489 61/383 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462548
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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