DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7g and CG11155

DIOPT Version :10

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:727 Identity:123/727 - (16%)
Similarity:251/727 - (34%) Gaps:242/727 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DFYQRIAPA------FIVVLSCRRPSPMNFYRNIMQL------------------------LYES 72
            |.|:::..|      :.:::........:|:|:|:||                        .|.|
  Fly   207 DSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNS 271

  Fly    73 VDTMIVQLVLVELGRPRRIAGP------------------RTHNLLLVDSLDA------LLDIEI 113
            |:....:||.|:..|...:...                  :|.:.|:.||:.|      .|:::.
  Fly   272 VNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGLHFLNLDN 336

  Fly   114 H------TYTAQSDTSEYYFIFL-QQRDALIPHDMQGVFAYC-WRHQLINCNVMTQSSGGQVLLH 170
            |      ..:..||.:....|.| .|.:|.|...:.|...:. .|..:...:::....  :.:..
  Fly   337 HQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDILKLKQ--EKIQK 399

  Fly   171 TYFPYAPGQCNDSQPTRINMFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDE-----G 230
            ..:.:.....|.|.||.             ::.|.:.|:.   |:|:.|:..|::.:.|     |
  Fly   400 VGYWHPDDGVNISDPTA-------------FYDSNIANIT---LVVMTREERPYVMVKEDKNLTG 448

  Fly   231 QRELRGLEGRLLQELSRRMNFSIQFSGLQDQ-----LKNRTTWTEKQLLQKLVQER----IAHLA 286
            .....|....||:.::.::.|..:...:.|.     :....:|  ..::|:|::.|    :|.:.
  Fly   449 NLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSW--NGIVQELMERRADLAVASMT 511

  Fly   287 IGYVRKRIQYATNLTPVFPHYSNRVVGCL----------LLNAHNLTSLEIW----------SFP 331
            |.|.|:.:   .:.|..|   .|..:|.|          |.:..|..::|||          ||.
  Fly   512 INYARESV---IDFTKPF---MNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFA 570

  Fly   332 ------FQALTW------------------ICLVFSFLSISCLALLHXRGAGDRLALVLAVYAAS 372
                  |....|                  |...|.|::.:.|     :|:|..           
  Fly   571 LFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFL----RQGSGLN----------- 620

  Fly   373 LGLPIDPPERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRL------PGNLQDLTHGDY 431
                   |:..|.:::...|..|.||:.|.|:|.|...|..   :|:      ..:|.:.|...|
  Fly   621 -------PKATSTRIVGGCWFFFCLIIISSYTANLAAFLTV---ERMISPIESASDLAEQTEISY 675

  Fly   432 AAVMGRTTLQDLREVPSLQDLLGL-----------KSVIVTSEREEEVLRTLDRCTLREGAGSHP 485
            ..:.|.:|:...|:     ..:|:           |:.:.....|:.:.|.::        ||  
  Fly   676 GTLEGGSTMTFFRD-----SKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVME--------GS-- 725

  Fly   486 LFFGLISQDALL--------HLTQRGHRAGAYHIIPQDVLEQQ-LAIYLQKHSHLASHLDHLVMS 541
              :..:.:..:|        :|||.|           .:|:.: ..|...|.|.....:...::.
  Fly   726 --YAFLMESTMLDYAVQRDCNLTQIG-----------GLLDSKGYGIATPKGSPWRDKISLAILE 777

  Fly   542 IRSVGLVHHWAGQMASERYFRSR--FLYREKRIRQ--------PDLWAVY-ILTAGLYLLSLVVF 595
            ::..|::     |:..::::::.  ...|:.:.::        .::..|: :|..|| .|::||.
  Fly   778 LQEKGII-----QILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGL-ALAVVVA 836

  Fly   596 ICELLASRRAGL 607
            |.|...:.|..|
  Fly   837 IFEFCWNSRKNL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 32/207 (15%)
PBP2_iGluR_Kainate 424..793 CDD:270432 75/437 (17%)
Lig_chan 554..828 CDD:459656 51/331 (15%)

Return to query results.
Submit another query.