DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7g and CG11155

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:727 Identity:123/727 - (16%)
Similarity:251/727 - (34%) Gaps:242/727 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DFYQRIAPA------FIVVLSCRRPSPMNFYRNIMQL------------------------LYES 72
            |.|:::..|      :.:::........:|:|:|:||                        .|.|
  Fly   207 DSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNS 271

  Fly    73 VDTMIVQLVLVELGRPRRIAGP------------------RTHNLLLVDSLDA------LLDIEI 113
            |:....:||.|:..|...:...                  :|.:.|:.||:.|      .|:::.
  Fly   272 VNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGLHFLNLDN 336

  Fly   114 H------TYTAQSDTSEYYFIFL-QQRDALIPHDMQGVFAYC-WRHQLINCNVMTQSSGGQVLLH 170
            |      ..:..||.:....|.| .|.:|.|...:.|...:. .|..:...:::....  :.:..
  Fly   337 HQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDILKLKQ--EKIQK 399

  Fly   171 TYFPYAPGQCNDSQPTRINMFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDE-----G 230
            ..:.:.....|.|.||.             ::.|.:.|:.   |:|:.|:..|::.:.|     |
  Fly   400 VGYWHPDDGVNISDPTA-------------FYDSNIANIT---LVVMTREERPYVMVKEDKNLTG 448

  Fly   231 QRELRGLEGRLLQELSRRMNFSIQFSGLQDQ-----LKNRTTWTEKQLLQKLVQER----IAHLA 286
            .....|....||:.::.::.|..:...:.|.     :....:|  ..::|:|::.|    :|.:.
  Fly   449 NLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSW--NGIVQELMERRADLAVASMT 511

  Fly   287 IGYVRKRIQYATNLTPVFPHYSNRVVGCL----------LLNAHNLTSLEIW----------SFP 331
            |.|.|:.:   .:.|..|   .|..:|.|          |.:..|..::|||          ||.
  Fly   512 INYARESV---IDFTKPF---MNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFA 570

  Fly   332 ------FQALTW------------------ICLVFSFLSISCLALLHXRGAGDRLALVLAVYAAS 372
                  |....|                  |...|.|::.:.|     :|:|..           
  Fly   571 LFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFL----RQGSGLN----------- 620

  Fly   373 LGLPIDPPERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRL------PGNLQDLTHGDY 431
                   |:..|.:::...|..|.||:.|.|:|.|...|..   :|:      ..:|.:.|...|
  Fly   621 -------PKATSTRIVGGCWFFFCLIIISSYTANLAAFLTV---ERMISPIESASDLAEQTEISY 675

  Fly   432 AAVMGRTTLQDLREVPSLQDLLGL-----------KSVIVTSEREEEVLRTLDRCTLREGAGSHP 485
            ..:.|.:|:...|:     ..:|:           |:.:.....|:.:.|.::        ||  
  Fly   676 GTLEGGSTMTFFRD-----SKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVME--------GS-- 725

  Fly   486 LFFGLISQDALL--------HLTQRGHRAGAYHIIPQDVLEQQ-LAIYLQKHSHLASHLDHLVMS 541
              :..:.:..:|        :|||.|           .:|:.: ..|...|.|.....:...::.
  Fly   726 --YAFLMESTMLDYAVQRDCNLTQIG-----------GLLDSKGYGIATPKGSPWRDKISLAILE 777

  Fly   542 IRSVGLVHHWAGQMASERYFRSR--FLYREKRIRQ--------PDLWAVY-ILTAGLYLLSLVVF 595
            ::..|::     |:..::::::.  ...|:.:.::        .::..|: :|..|| .|::||.
  Fly   778 LQEKGII-----QILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGL-ALAVVVA 836

  Fly   596 ICELLASRRAGL 607
            |.|...:.|..|
  Fly   837 IFEFCWNSRKNL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 31/204 (15%)
ANF_receptor 61..393 CDD:279440 31/185 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 75/437 (17%)
Lig_chan 555..829 CDD:278489 51/331 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463070
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.