DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Ekar

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:615 Identity:118/615 - (19%)
Similarity:217/615 - (35%) Gaps:172/615 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LVDSLDA-----LLDIEIHTYTAQSDTSEYYF------------IFLQQRDALIPHDMQGVFAYC 148
            |||:.|.     |.||.::        |.:.|            ..|:...||: .|...|||..
  Fly   253 LVDTADVGVKQILKDIGLY--------SHHIFKKPYLNLHIKKSTILESEPALM-FDSVYVFAIG 308

  Fly   149 WR-----HQL----INCNVMTQSSGGQVLLHTYFPY----------APGQCNDSQPTRINMFL-- 192
            .:     |.|    |:|.......||..|::    |          .|.|..|.|..:..:.|  
  Fly   309 LQTLEQSHSLTLLNISCEEENSWDGGLSLIN----YLNAVEWKGLTGPIQFKDGQRVQFKLDLIK 369

  Fly   193 ---------GESWKHRD--------YFPSKLHNLNGCPLIVLARKVSPFLDLD-----EGQRELR 235
                     ||...|..        :|.:...|:.   |:|:....:|::.:.     .|.....
  Fly   370 LKQHSIVKVGEWTPHGHLNITEPSMFFDAGSMNVT---LVVITILETPYVMMHYGKNFTGNERFY 431

  Fly   236 GLEGRLLQELSRRMNFSIQFSGLQDQ---LKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQYA 297
            |....:|:.:||.:.|......:.|:   .|:..|.....::.:|::.: |.||:|.:  .|.||
  Fly   432 GFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYK-ADLAVGSM--TITYA 493

  Fly   298 TNLTPVFPH-YSNRVVGCL----------LLNAHNLTSLEIWSFPFQA--LTWICLV----FSFL 345
            ......|.. :.|..:..|          |.:..|..::|||.:...|  |..:|:.    .|.:
  Fly   494 RESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPI 558

  Fly   346 SISCLAL--LHXRGAGDRLALVLAVYAASLGL-----PIDPPERPSLQLLFASWLIFGLIVRSMY 403
            ...|:..  |.....|::.:|..:.: .::|.     |...|...|.:::.::|..|.||:.:.|
  Fly   559 EWKCINACDLENISIGNQFSLTDSFW-FTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASY 622

  Fly   404 SALLFFILRYHLHQRLPGNLQDL---THGDYAAVMGRTTLQDLREVPSLQDLLGLKSVIVTSERE 465
            :|.|...|..........|.:||   |...|..:...:|:...|:           |||   |..
  Fly   623 TANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRD-----------SVI---ETY 673

  Fly   466 EEVLRTLDRCTLREGAGSHPLFFGLISQDALLHLTQRGHRAGAY----------HIIPQDVLEQQ 520
            :::.|::|        ...|..|....:|.:..:.|     |.|          :|:.:|....|
  Fly   674 KKIWRSMD--------NKKPSAFTTTYEDGIKRVNQ-----GNYAFLMESTMLDYIVQRDCNLTQ 725

  Fly   521 L---------AIYLQKHSHLASHLDHLVMSIRSVGLVHHWAGQMASERYFRS--RFLYREKRIRQ 574
            :         .|...|.|.....:...::.::..|.:     ||..::::::  ....|:...:|
  Fly   726 IGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDI-----QMLYDKWWKNTDETCTRKNTSKQ 785

  Fly   575 --------PDLWAVY-ILTAGLYLLSLVVF 595
                    ..:..|: :|.||:.:.::|.|
  Fly   786 SKANSLGLESIGGVFVVLIAGIIVAAVVAF 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 32/147 (22%)
ANF_receptor 39..371 CDD:279440 29/130 (22%)
PBP2_iGluR_Kainate 402..771 CDD:270432 77/407 (19%)
Lig_chan 533..807 CDD:278489 56/306 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463071
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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