DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and KaiR1D

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster


Alignment Length:605 Identity:120/605 - (19%)
Similarity:224/605 - (37%) Gaps:150/605 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RTHNLLLVDSLDALLDIEIHTYTA---QSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRH--QLI 154
            |:.||..|.|..||:...:|.:..   ..|||       ||.| :.|....|  ...|:|  .||
  Fly   290 RSANLTTVRSETALMYDAVHLFAKALHDLDTS-------QQID-IHPISCDG--QSTWQHGFSLI 344

  Fly   155 NCNVMTQSSGGQVLL---HTYF---------PYAP------GQCNDSQPTRINMFLGESWKHRDY 201
            |...:.:..|...::   |..|         ...|      |..|.:.|..||.....|.|.::.
  Fly   345 NYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEI 409

  Fly   202 FPSKLHNLNGCPLIVLARKVSPFLDLDE------GQRELRGLEGRLLQELSRRM--NFSIQF--S 256
            ..    ||....|:|.....:|:....|      |..:..|....|:.|:|:.:  |:.||.  .
  Fly   410 EA----NLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPD 470

  Fly   257 GLQDQLKNRTTWTEKQLLQKLVQER----IAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLL 317
            |....| |:.|.....::::|:::|    ||.|.|.:.|::   |.:.|..|.:     :|..:|
  Fly   471 GSYGSL-NKLTGEWNGMIRELLEQRADLAIADLTITFEREQ---AVDFTTPFMN-----LGVSIL 526

  Fly   318 NAHNLTS-LEIWSF--PFQALTWICLVFSFLSISCLALL---------------HXRGAGDRLAL 364
            ....:.. ..::||  |.....||.:..::|.:|.|..:               | .....:..|
  Fly   527 YRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTL 591

  Fly   365 VLAVYAASLGLPIDP-----PERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQ 424
            :..::.| :|..:..     |:..|.:::...|..|.||:.|.|:|.|...|..........:.:
  Fly   592 LNCMWFA-IGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAE 655

  Fly   425 DL---THGDYAAVMGRTTLQDLRE--VPSLQDLLGL----KSVIVTSEREEEVLRTLDRCTLREG 480
            ||   |...|.|:.|.:|....|:  :.:.|.:...    :..:.|:...|.|.|      :.:|
  Fly   656 DLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVER------VAKG 714

  Fly   481 AGSHPLFFGLISQDALLHLTQRG---HRAGAYHIIPQDVLE-QQLAIYLQKHSHLASHLDHLVMS 541
            .||:..   |:...::.::|:|.   .:.|.       :|: :...|....:|...:.::.:::.
  Fly   715 KGSYAF---LMESTSIEYVTERNCELTQVGG-------MLDTKSYGIATPPNSPYRTAINSVILK 769

  Fly   542 IRSVGLVH----HWAGQMASERYFRSRFLYREKR------------------IRQPDLWAVYILT 584
            ::..|.:|    .|               ::|||                  :...::..|:::.
  Fly   770 LQEEGKLHILKTKW---------------WKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVL 819

  Fly   585 AGLYLLSLVVFICELLASRR 604
            .|...::.|:.:||.:...|
  Fly   820 MGGMGVACVIAVCEFVWKSR 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 28/116 (24%)
ANF_receptor 42..378 CDD:279440 24/97 (25%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 77/410 (19%)
Lig_chan 547..823 CDD:278489 51/307 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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