DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Nmdar1

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_730940.1 Gene:Nmdar1 / 40665 FlyBaseID:FBgn0010399 Length:997 Species:Drosophila melanogaster


Alignment Length:461 Identity:102/461 - (22%)
Similarity:165/461 - (35%) Gaps:127/461 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 CPLIVLARKVSPFLDLDEGQREL--RGLEGRLLQELSRRMNFSIQFSGLQDQ------LKNRT-- 266
            |||         |.:.|....|.  ||....||.|||:|:||:...:...|.      |:|.|  
  Fly   450 CPL---------FNNSDATANEFCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGA 505

  Fly   267 -----TWTEKQLLQKLVQER----IAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLLNAHNL 322
                 .||  .|:.:||.||    :|.|.|.  .:|.:|.....|.      :..|..:|.....
  Fly   506 MTLRKEWT--GLIGELVNERADMIVAPLTIN--PERAEYIEFSKPF------KYQGITILEKKPS 560

  Fly   323 TSLEIWSF--PFQALTWICLVFSFLSISCLALLHXR------------GAGDRLALVL--AVYAA 371
            .|..:.||  ||....||.::.|...::.:..|..|            .:.:..||.|  ||:.|
  Fly   561 RSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFA 625

  Fly   372 -----SLGLPIDPPERPSLQLLFASWLIFGLIVRSMYSALL--FFILRYHLHQ-------RLPGN 422
                 :.|:....|...|.::|...|..|.:|:.:.|:|.|  |.:|.....:       ||...
  Fly   626 WGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690

  Fly   423 LQDLTHGDYAAVMGRTTLQDL---REV------------------PSLQDLL--GLKSVIVTSER 464
            :::||   .|.|.|.:.  |:   |:|                  .::||:.  .|.:.|..|.|
  Fly   691 MENLT---CATVKGSSV--DMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDSSR 750

  Fly   465 -EEEVLRTLDRCTLREGAGSHPLFFGLIS----QDALLHLTQRGHRAGAYHIIPQDVLEQQLAIY 524
             |.|..:..:..|..|..|......||..    .||:.......|.:|.     .:.|::|... 
  Fly   751 LEYEASKDCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGF-----MEKLDKQWIF- 809

  Fly   525 LQKHSHLASHLDHLVMSIRSVGL-------------VHHWAGQMASERYFRSRFLYREKRI---- 572
               |.|:..:.:....:..::||             :....|.:..|..::...:.::||:    
  Fly   810 ---HGHVQQNCELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQKRLDIAR 871

  Fly   573 RQPDLW 578
            ...|.|
  Fly   872 HAADKW 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
Nmdar1NP_730940.1 PBP1_iGluR_NMDA_NR1 12..405 CDD:107374
ANF_receptor 58..371 CDD:279440
PBP2_iGluR_NMDA_Nr1 417..818 CDD:270437 94/400 (24%)
HisJ 451..>558 CDD:223904 34/125 (27%)
Periplasmic_Binding_Protein_Type_2 <516..651 CDD:304360 32/142 (23%)
Lig_chan 575..838 CDD:278489 56/276 (20%)
CaM_bdg_C0 854..882 CDD:287524 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463043
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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