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Protein Alignment Ir7g and Grik1

DIOPT Version :9

Sequence 1:	NP_001368933.1	Gene:	Ir7g / 31694	FlyBaseID:	FBgn0029968	Length:	607	Species:	Drosophila melanogaster
Sequence 2:	NP_001104587.1	Gene:	Grik1 / 29559	RGDID:	2732	Length:	949	Species:	Rattus norvegicus

Alignment Length:	710	Identity:	136/710 - (19%)
Similarity:	236/710 - (33%)	Gaps:	224/710 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LNFESMKYIGAQTQAASI----NHHVAQALRVFIEDFYQRIAPAFIVVLSCRRPSPMNFYRNIMQ 67
            |:.|..:|.|.......:    |.||:..:..:..:..|  ||          |.|.....:.|.
  Rat   265 LDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQ--AP----------PRPETGLLDGMM 317

  Fly    68 -----LLYESVDTMIV------QLVLVEL----GRPRRIAGPRTHNLL---------------LV 102
                 |:|::|..:.:      ||.:..|    .:|.|: |||..||:               ..
  Rat   318 TTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRL-GPRFMNLIKEARWDGLTGRITFNKT 381

  Fly   103 DSLDALLDIEIHTYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLINCNVMTQSSGGQV 167
            |.|....|::|              |.|::..                         |:.:.|:|
  Rat   382 DGLRKDFDLDI--------------ISLKEEG-------------------------TEKASGEV 407

  Fly   168 LLHTYFPYAP-GQCNDSQPTRINMFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQ 231
            ..|.|..:.. |..|.:  :.:||..|    :||...:...:|....|||......|::...:..
  Rat   408 SKHLYKVWKKIGIWNSN--SGLNMTDG----NRDRSNNITDSLANRTLIVTTILEEPYVMYRKSD 466

  Fly   232 RELRG---LEG---RLLQELSRRMNFSIQFS-------GLQDQLKNRTTWTEKQLLQKLVQERIA 283
            :.|.|   .||   .||:|||..:.|.....       |.|:. |.......|:|:.......:|
  Rat   467 KPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQND-KGEWNGMVKELIDHRADLAVA 530

  Fly   284 HLAIGYVRKRIQYATNLTPVFPHYSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFL 345
            .|.|.|||:::   .:.:..|     ..:| .:|....|.|:..::||  |.....|:.::.:.|
  Rat   531 PLTITYVREKV---IDFSKPF-----MTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACL 587

  Fly   346 SISCLALLHXRGAGDRLALVLAVYAASLGLPIDP------------------------------P 380
            .:||:..:. |         ...|......|.:|                              |
  Rat   588 GVSCVLFVIAR---------FTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMP 643

  Fly   381 ERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDL---THGDYAAVMGRTTLQD 442
            :..|.:::...|..|.||:.|.|:|.|...|.....:....:..||   |..:|.||...:|:..
  Rat   644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTF 708

  Fly   443 LREVPSLQDLLGLKSVIVT---------SEREEEVLRTLDRCTLREGAGSHPLFFGLISQDALLH 498
            .:           ||.|.|         |.::..:::..|....|.....:.|   |:...::.:
  Rat   709 FK-----------KSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYAL---LMESTSIEY 759

  Fly   499 LTQR--------------GHRAGAYHIIPQDVLEQQLAIYLQKHSHLASHLDHLVMSIRSVGLVH 549
            :|||              |:..|.....|          |..|       :...::.::..|.:|
  Rat   760 VTQRNCNLTQIGGLIDSKGYGVGTPIGSP----------YRDK-------ITIAILQLQEEGKLH 807

  Fly   550 HWAGQMASERYFRSRFLYRE-----KRIRQPDLWAVYILTAGLYLLSLVVFICELLASRR 604
                 |..|:::|......|     ..:...::..::|:.|...:||:.|.|.|.|...|
  Rat   808 -----MMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 862

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.