DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and GRIN2C

DIOPT Version :10

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_054171851.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1265 Species:Homo sapiens


Alignment Length:538 Identity:96/538 - (17%)
Similarity:170/538 - (31%) Gaps:180/538 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QALRVFIEDFYQRIAPAFIVVLSCRRPSPMNFYRNIMQLLYES-VDTMIVQLVLVELGRPRRIAG 93
            |.|:|..:...:....||.|:.|. .|....|...:..:...| |...::.:|.:|||.    .|
Human   148 QQLQVLFKVLEEYDWSAFAVITSL-HPGHALFLEGVRAVADASHVSWRLLDVVTLELGP----GG 207

  Fly    94 PRTHNLLLVDSLDALLDIEIHTYTAQSDTSEYYFIFLQQRDA---------LIPHDMQG------ 143
            ||.....|:..|||      ..:.|.....|...:|.:...|         |:|:...|      
Human   208 PRARTQRLLRQLDA------PVFVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPP 266

  Fly   144 ---------VFAYCWR---HQLINCNVMTQSSGGQVLLHTYF------PYAPGQC----NDSQPT 186
                     |....||   .|.:...|...:.|.    |:|:      |...|.|    ....|.
Human   267 ATFPVGLISVVTESWRLSLRQKVRDGVAILALGA----HSYWRQHGTLPAPAGDCRVHPGPVSPA 327

  Fly   187 RINMF---LGESWKHRDYF---------PSKL------HNL------------------------ 209
            |...:   |..:|:.||:.         |:.:      |.|                        
Human   328 REAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSA 392

  Fly   210 -------------------------------NGC-PLIVLARK----------VSPFLDLDEGQR 232
                                           .|| |..|..|:          |:|:..|.    
Human   393 SLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLC---- 453

  Fly   233 ELRGLEGRLLQELSRRMNFSIQF----SGLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYV--- 290
             .:|....:|::|:|.:.||...    :|...: :.|..|  ..::.::..:| |.:|||.:   
Human   454 -CKGFCIDILKKLARVVKFSYDLYLVTNGKHGK-RVRGVW--NGMIGEVYYKR-ADMAIGSLTIN 513

  Fly   291 RKRIQYATNLTPVFPHYSNRVVGCLLLNAHNLTSLEIWSFPFQALTWI-----CL------VFSF 344
            .:|.:......|    :....:..::..::...|...:..|:....|:     ||      ||.|
Human   514 EERSEIVDFSVP----FVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 574

  Fly   345 LSISCLA----LLHXRGAG------DRLALVLAVYAASLGLPIDPPERPSLQLLFASWLIFGLIV 399
            ...|.::    |...:.:|      .:...:|.....:..:||:.|...:.:::...|..|.:|.
Human   575 EYFSPVSYNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIF 639

  Fly   400 RSMYSALL--FFILRYHL 415
            .:.|:|.|  |.|...::
Human   640 LASYTANLAAFMIQEQYI 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
GRIN2CXP_054171851.1 PBP1_iGluR_NMDA_NR2 28..384 CDD:380601 49/250 (20%)
PBP2_iGluR_NMDA_Nr2 400..829 CDD:270436 47/271 (17%)
NMDAR2_C 866..>941 CDD:463148
Blue background indicates that the domain is not in the aligned region.

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