DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7g and GRIK5

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:572 Identity:111/572 - (19%)
Similarity:195/572 - (34%) Gaps:189/572 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AYCWRH--QLINCNVMTQSSG--GQVLLHTYFPYAPGQCNDSQPTRINMFLGESWK--HRD---Y 201
            |..|.|  .|:|...|.:..|  |:|..:          :..|.|...:.:.|..:  ||:   :
Human   337 ANIWPHGTSLMNYLRMVEYDGLTGRVEFN----------SKGQRTNYTLRILEKSRQGHREIGVW 391

  Fly   202 FPSKLHNLNGCPLIV-----LARKV--------------SPFLDLDEGQRELRGLEGRLLQELSR 247
            :.::...:|...|.:     ||.|.              .|......|.....|....:|:||:.
Human   392 YSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERFEGFCVDMLRELAE 456

  Fly   248 RMNFSIQFSGLQDQL----KNRTTWTEKQLLQKLVQERIAHLAIGYV------RKRIQYATNLTP 302
            .:.|..:...::|.|    :...:||  .::.:|:..:.|.||:...      .|.|.::.    
Human   457 LLRFRYRLRLVEDGLYGAPEPNGSWT--GMVGELINRQKADLAVAAFTITAEREKVIDFSK---- 515

  Fly   303 VFPHYSNRVVGCLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXRGAGDRLALV 365
              |..:..:  .:|...|.......:||  ||....|:.::.::|::||:..|. |         
Human   516 --PFMTLGI--SILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR--------- 567

  Fly   366 LAVY----------------------AASLGLPID---------PPERPSLQLLFASWLIFGLIV 399
            |:.|                      ..||..|:.         .|...|.:.:...|..|.||:
Human   568 LSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLII 632

  Fly   400 RSMYSALLFFIL---RYHLHQRLPGNLQDLTHGDYAAVMGRTTL---QDLR---------EVPSL 449
            .|.|:|.|...|   |..:......:|.|.|:.:|..:...:|:   |:.|         .:.|.
Human   633 ISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSK 697

  Fly   450 QDLLGLKSVIVTSEREEEVLRTLD------------------RCTLREGAGSHPLFFGLISQDAL 496
            |..:.:||.      ||.:.|.|:                  .|.|.:..|.             
Human   698 QPSVFVKST------EEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGL------------- 743

  Fly   497 LHLTQRGHRAGAYHIIP-----QDVLEQQLAI-YLQKHSHLASHLDHLVMSIRSVGLVHHW--AG 553
              |..:|:..|    :|     :|  |..||| .||:::.|..             |...|  .|
Human   744 --LDTKGYGIG----MPLGSPFRD--EITLAILQLQENNRLEI-------------LKRKWWEGG 787

  Fly   554 QMASERYFRSRFLYREKRIRQPDLWAVYI-LTAGLYLLSLVVFICELLASRR 604
            :...|...|::.|..|      ::..::| |..|| ::::.|.:.|.:.|.|
Human   788 RCPKEEDHRAKGLGME------NIGGIFIVLICGL-IIAVFVAVMEFIWSTR 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 14/71 (20%)
ANF_receptor 42..379 CDD:279440 11/51 (22%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 80/429 (19%)
Lig_chan 546..816 CDD:278489 62/324 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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