DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and GRIK3

DIOPT Version :10

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:564 Identity:118/564 - (20%)
Similarity:205/564 - (36%) Gaps:126/564 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AQTQAASINHHVAQALRV-FIEDFYQRIAPAFIVVLSCRRPSPMNFYR----NIMQLLYESVDTM 76
            :.|.||.|   :.||:.: .:.::|..|.....:......|     ||    |:......:||..
Human   234 SHTMAAQI---LKQAMAMGMMTEYYHFIFTTLDLYALDLEP-----YRYSGVNLTGFRILNVDNP 290

  Fly    77 IVQLVLVELGRPRRIAGPRTHNLLL--VDSLDALLDIEIHTYTAQSDTSEYYFIFLQQRDALIPH 139
            .|..::.:....|..|.||:.:.||  |...||.|     .|.|....|..|    |:...:..:
Human   291 HVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAAL-----LYDAVHIVSVCY----QRAPQMTVN 346

  Fly   140 DMQGVFAYCWRHQ-------------------LINCNVMTQSSGGQVLLHTYFPYAPGQCNDSQP 185
            .:|     |.||:                   |....|..::||    |.|.|........:...
Human   347 SLQ-----CHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSG----LRTDFDLDIISLKEDGL 402

  Fly   186 TRINMF-------LGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRG---LEG- 239
            .::.::       :.|..|.|.  |:...:|....|||......||:...:..|.|.|   .|| 
Human   403 EKVGVWSPADGLNITEVAKGRG--PNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGY 465

  Fly   240 --RLLQELSRRMNFSIQFS-------GLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQ 295
              .||:||:..:.||.:..       |.||. |.:.....|:|:.......:|.|.|.:||::  
Human   466 CIDLLKELAHILGFSYEIRLVEDGKYGAQDD-KGQWNGMVKELIDHKADLAVAPLTITHVREK-- 527

  Fly   296 YATNLTPVFPHYSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALL---- 353
             |.:.:..|     ..:| .:|....|.|:..::||  |.....|:.::.::|.:||:..:    
Human   528 -AIDFSKPF-----MTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARF 586

  Fly   354 --------HXRGAGDRLA----LVLAVYAASLGLPIDP-----PERPSLQLLFASWLIFGLIVRS 401
                    |....|..:.    .:|..:...:|..:..     |:..|.:::...|..|.||:.|
Human   587 SPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIIS 651

  Fly   402 MYSALLFFILRYHLHQRLPGNLQDL---THGDYAAVMGRTTLQDLR--EVPSLQDL---LGLKSV 458
            .|:|.|...|.....:....:..||   |..:|.||....|:...:  ::.:.:.:   :..|..
Human   652 SYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS 716

  Fly   459 IVTSEREEEVLRTLDRCTLREGAGSHPLFFGLISQDALLHLTQR 502
            .:....||.:.|.|        ...:.|   |:....:.::|||
Human   717 ALVKNNEEGIQRAL--------TADYAL---LMESTTIEYVTQR 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 41/208 (20%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 72/337 (21%)

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