DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and glr-6

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_741822.2 Gene:glr-6 / 180955 WormBaseID:WBGene00001617 Length:844 Species:Caenorhabditis elegans


Alignment Length:454 Identity:81/454 - (17%)
Similarity:159/454 - (35%) Gaps:143/454 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 HNLLLVDSLDALLDIEIHTYT----------------AQSDTSEYYFIFLQQRDALIPHDMQGV- 144
            ||..|:.:||.|.| .:..||                .|:|.:.......|:..|.||.:.:.. 
 Worm   236 HNWFLITALDDLND-HLSQYTHNGMRVSLLTVSKEKWNQNDLAIKLPDMYQEYLAKIPSNPRTPF 299

  Fly   145 --FAYCWRHQLINCNVMTQSSGGQVLLHTYFPYAPGQCNDSQPTR------INMFLGES------ 195
              ||:.:...|:.|    |:...:::          .|.|::..:      :..|.|.:      
 Worm   300 KDFAFIFDSILLAC----QAGDRRII----------SCGDNEAVKKFKLPIVKPFKGLTGKISFN 350

  Fly   196 --------------------------WK-------------------HRDYFPS-------KLHN 208
                                      ||                   |..|..|       |:.:
 Worm   351 GTSDRSDSELHIWEMGITGAGLHTGIWKSTWEGSKELTMLAKNIPGTHEHYQASVRESRTLKVTS 415

  Fly   209 LNGCPLIVLARKVSPFLDLDEGQRELRGLEGRLLQELSRRMNFSIQFSGLQD----QLKNRT-TW 268
            ::..|.::  .|:.|     :|:.:..|....||.:|:..::|:.....::|    :.||.| .|
 Worm   416 IHEKPYVI--EKIMP-----DGRIKHEGFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDEW 473

  Fly   269 TEK--QLLQKLVQERIAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLL----NAHNLTSLEI 327
            ...  ::|:......:|.:.:...|..:   .:.|..|..     :|..:|    |..:.:||..
 Worm   474 DGMIGEILRGDADMAVAPITVTATRLEV---IDFTDPFLQ-----LGISMLMRQPNPKSSSSLTR 530

  Fly   328 WSFPFQALTW----ICLVFSFLSISCLALLHXRGAGDRLA-------LVLAVYAASLGLPIDPPE 381
            :.:|..|..|    |..|.:.|.::..|:|..:.:.....       ||..:..|..|...   :
 Worm   531 FLWPLSASVWTFSAIATVITALLVTVAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYNC---Q 592

  Fly   382 RPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGN----LQDLTHGDYAAVMGRTTLQ 441
            ..:.:|:.|.|..|.|::.:.|:|....:|... .:.:|.|    |.:.|..::.:::|.:|:|
 Worm   593 AGATRLISAVWWSFTLVLIAQYTANFAALLTVD-RKSMPFNSFEELGNQTEYNFGSILGGSTMQ 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
glr-6NP_741822.2 PBP1_iGluR_non_NMDA-like 21..394 CDD:380591 26/172 (15%)
PBP2_iGluR_Kainate 409..764 CDD:270432 52/266 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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