DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and glr-8

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:460 Identity:85/460 - (18%)
Similarity:168/460 - (36%) Gaps:106/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LHNLNGCPLIVLARKVSP-------FLD---LDEGQRELRGLEGRLLQELSRRMNFSIQF----- 255
            |..:.|..|.::...:.|       |.|   .|:|...  |:...:|:|:.:|:|.:.:.     
 Worm    56 LSEMKGRTLKMVVPAIEPPYVNYVNFSDAAVTDKGYGP--GVVMEILKEIGKRLNLTYEILPALG 118

  Fly   256 SGLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQY----ATNLTPVFPHYSNRVVGCLL 316
            |...:.|..  :||  ....:||:..:..||.|.:   ::|    ..:||  :| :.....|.::
 Worm   119 STWGEYLNG--SWT--GAFGQLVRGEVDLLAGGAI---MEYDRSVIADLT--YP-FQFEPTGIMI 173

  Fly   317 LNAHNL--TSLEIWSFPFQALTWICLVFSFLSISCLALLHXRGAGDRLALVLAVYAASLGLPIDP 379
            .:....  .:|.|.:.||....|:......|....:.|:. .       ::..||......|.:.
 Worm   174 RSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTN-------IIRKVYEEMTVTPFES 231

  Fly   380 -------------PERP---SLQLLFASWLIFGLIVRSMYS---ALLFFILRYHL-HQRLPGNLQ 424
                         ||:|   |.::|.|.|.:..:.:.:.::   ..||.:.:.:: .|.:...::
 Worm   232 IWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQNIDQLVR 296

  Fly   425 DLTHGDYAAVMG-----RTTLQDLREVPSLQDLLGLKSVIVTSEREEEVLRTLDR--CTLREGAG 482
            .:..|.:..||.     ||.:....::|..:||  ...:||  ..:.:.:..:.|  ..:|...|
 Worm   297 LVKQGKFEIVMDENSFTRTEMIARSKLPVYRDL--WHEMIV--NHKVKYVNGIARGVAFVRANPG 357

  Fly   483 SHPLFFGLISQDALLHLTQRGHRAGAYH-----IIPQDVLEQQLAIYLQKHSHLASHLDHLVMSI 542
                 :.|:...|.|:..       ||.     :....:|...|:|.|.|:|..:.:....:..:
 Worm   358 -----YALLGPMATLNFY-------AYSDCKVILFNDGILPVYLSIPLVKNSIYSPYFSTKIREM 410

  Fly   543 RSVGLVHHWAGQMASERYFRSRFL------------YREKRIRQPDLWAVYILTAGLYLLSLVVF 595
            ...|....|.....|  |...:.:            |.:.:..|...| |::..||   |.|.:|
 Worm   411 VERGFTQKWIADYRS--YVAMQKINECNSTTIGPKSYLDLKRAQGAFW-VFLGGAG---LGLALF 469

  Fly   596 ICELL 600
            :.|.:
 Worm   470 VGEFI 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 71/396 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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