DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7g and glr-7

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:560 Identity:99/560 - (17%)
Similarity:176/560 - (31%) Gaps:208/560 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QTQAASINHHVAQALRVFIEDF--------YQRIAPAFIVVL--------SCR-------RPSPM 59
            |.:.||||..:..|....:|.|        .||:...:::..        ||.       ||.|:
 Worm   159 QLRMASINSLILVAKTENVERFTLEAADFIEQRVFNTYVLTKDITAFKCDSCESAFMFWLRPFPV 223

  Fly    60 N----------------------------------FYRNIMQLLYESVDTMIVQLVLVELGRPRR 90
            .                                  ||.|:|...:|::.||              
 Worm   224 GKLMEIRDLDDYLFRNEIGLELDYSINGWDSLNVAFYMNVMGYAFETIRTM-------------- 274

  Fly    91 IAGPRTHNLLLVDSLDALLDIEIHTYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLIN 155
                           :|..|: :.|:|.|:..||             |:....|     |..::|
 Worm   275 ---------------NATFDV-LPTFTCQTGPSE-------------PNITTTV-----RDIILN 305

  Fly   156 CNVMTQSSGGQVLLHTYFP------YAPGQCNDSQPTRINMFLGESWKHRDYFP-SKL------- 206
            .......:..:..|:.:|.      |...:..|.:....|..:| .|.     | |||       
 Worm   306 DPAHEYGNYTEAGLNMFFQDVEVRIYKIDRDRDHEDALFNKEVG-VWS-----PISKLSVMYGTL 364

  Fly   207 ----HNLNGCPLIVLARKVSPFLD-LDEGQRELRGLEGRLLQELSRRMNFSIQFSGLQD----QL 262
                .|||...::.|.:  .||:. ..:......|....|:..:...:||:.....::|    .:
 Worm   365 QVDVRNLNIFRVVTLIQ--PPFVQRTGDPDTPYEGYCIDLINMIQVEVNFTYTIYEVEDGSFGTM 427

  Fly   263 KNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLLNAHNLTSLEI 327
            .:...|  ..|:..||... |.:|:..:....:...::....|:|.  :||..:|  .....:|.
 Worm   428 DDNGNW--NGLIGALVSGS-ADIALAPLSVMAERENDVDFTVPYYD--LVGTTIL--MKKADVEY 485

  Fly   328 WSFPFQAL----TWICLVFSFLSIS--------------------------------------CL 350
            ..|.|..:    .|:|:|.::|..|                                      |:
 Worm   486 SLFKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCM 550

  Fly   351 ALLHXRGAGDRLALVLAVYAASLGLPIDPPERPSLQLLFASWLIFGLIVRSMYSA-LLFFILRYH 414
            ..|..:|.|                  :.|:..|.:|:.|:|.:||.|:.:.|:| |..|:....
 Worm   551 TSLTPQGGG------------------EAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSR 597

  Fly   415 LHQRLPGNLQDLTHG---DYAAVMGRTTLQDLREVPSLQD 451
            |.|.: .:|.||...   :||.:.|..:....|.:..:::
 Worm   598 LEQPI-SSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEE 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556 12/60 (20%)
PBP2_iGluR_putative 373..767 CDD:270435 52/292 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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