DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Grin2d

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_036008580.1 Gene:Grin2d / 14814 MGIID:95823 Length:1345 Species:Mus musculus


Alignment Length:409 Identity:76/409 - (18%)
Similarity:126/409 - (30%) Gaps:148/409 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ALIPHDMQGVFAYCWRHQL---INCNVMTQSSGGQVLLHTY--FPYAPGQCNDSQPTR-----IN 189
            |.:|..:..|.:..||..|   :...|...:.|.|.||..|  .|.....|.....|.     ..
Mouse   300 APLPAGLFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESLHR 364

  Fly   190 MFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDE-----GQRELRGLE---------GR 240
            .|:..:|.:|||..::...|....|:|::      |..|.     |..|.:.|.         ||
Mouse   365 YFMNITWDNRDYSFNEDGFLVNPSLVVIS------LTRDRTWEVVGSWEQQTLRLKYPLWSRYGR 423

  Fly   241 LLQELSRRMNFSI---------------QFSG--LQDQLK-----NRT-------------TWTE 270
            .||.:....:.::               ..||  ::|.:.     |||             ...|
Mouse   424 FLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSLVAPRSPPPDAPRPE 488

  Fly   271 KQLLQKL---VQERIAHLAIGYV-----------RKRIQYATN--LTPVFPHYSNRVVGCLLLNA 319
            |:..:..   :.:|:|| .||:.           .|:|....|  :..||...::..:|.|.:|.
Mouse   489 KRCCKGFCIDILKRLAH-TIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINE 552

  Fly   320 HNL-----------TSLEI------------------WSF------PFQALTWI-----CL---- 340
            ...           |.:.:                  |..      |:....|:     ||    
Mouse   553 ERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLAFAWLMPPMSPEPYSPAVWVMMFVMCLTVVA 617

  Fly   341 --VFSFLSISCLALLHXRGAGDR---------------LALVLAVYAASLGLPIDPPERPSLQLL 388
              ||.|..:|.:........|.|               .|||.     :..:|::.|...:.:::
Mouse   618 VTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVF-----NNSVPVENPRGTTSKIM 677

  Fly   389 FASWLIFGLIVRSMYSALL 407
            ...|..|.:|..:.|:|.|
Mouse   678 VLVWAFFAVIFLASYTANL 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
Grin2dXP_036008580.1 Periplasmic_Binding_Protein_type1 <156..415 CDD:415822 28/120 (23%)
PBP2_iGluR_NMDA_Nr2 432..849 CDD:270436 44/271 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846593
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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