DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Grik5

DIOPT Version :10

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:572 Identity:110/572 - (19%)
Similarity:195/572 - (34%) Gaps:189/572 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AYCWRH--QLINCNVMTQSSG--GQVLLHTYFPYAPGQCNDSQPTRINMFLGESWK--HRD---Y 201
            |..|.|  .|:|...|.:..|  |:|..:          :..|.|...:.:.|..:  ||:   :
Mouse   360 ANIWPHGTSLMNYLRMVEYDGLTGRVEFN----------SKGQRTNYTLRILEKSRQGHREIGVW 414

  Fly   202 FPSKLHNLNGCPLIV-----LARKV--------------SPFLDLDEGQRELRGLEGRLLQELSR 247
            :.::...:|...|.:     ||.|.              .|......|.....|....:|:||:.
Mouse   415 YSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERFEGFCVDMLRELAE 479

  Fly   248 RMNFSIQFSGLQDQL----KNRTTWTEKQLLQKLVQERIAHLAIGYV------RKRIQYATNLTP 302
            .:.|..:...::|.|    :...:||  .::.:|:..:.|.||:...      .|.|.::.    
Mouse   480 LLRFRYRLRLVEDGLYGAPEPNGSWT--GMVGELINRQKADLAVAAFTITAEREKVIDFSK---- 538

  Fly   303 VFPHYSNRVVGCLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXRGAGDRLALV 365
              |..:..:  .:|...|.......:||  ||....|:.::.::|::||:..|..|         
Mouse   539 --PFMTLGI--SILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR--------- 590

  Fly   366 LAVY----------------------AASLGLPID---------PPERPSLQLLFASWLIFGLIV 399
            |:.|                      ..||..|:.         .|...|.:.:...|..|.||:
Mouse   591 LSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLII 655

  Fly   400 RSMYSALLFFIL---RYHLHQRLPGNLQDLTHGDYAAVMGRTTL---QDLR---------EVPSL 449
            .|.|:|.|...|   |..:......:|.|.|:.:|..:...:|:   |:.|         .:.|.
Mouse   656 ISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSK 720

  Fly   450 QDLLGLKSVIVTSEREEEVLRTLD------------------RCTLREGAGSHPLFFGLISQDAL 496
            |..:.:||.      ||.:.|.|:                  .|.|.:..|.             
Mouse   721 QPSVFVKST------EEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGL------------- 766

  Fly   497 LHLTQRGHRAGAYHIIP-----QDVLEQQLAI-YLQKHSHLASHLDHLVMSIRSVGLVHHW--AG 553
              |..:|:..|    :|     :|  |..||| .||:::.|..             |...|  .|
Mouse   767 --LDTKGYGIG----MPLGSPFRD--EITLAILQLQENNRLEI-------------LKRKWWEGG 810

  Fly   554 QMASERYFRSRFLYREKRIRQPDLWAVY-ILTAGLYLLSLVVFICELLASRR 604
            :...|...|::.|..|      ::..:: :|..|| ::::.|.:.|.:.|.|
Mouse   811 RCPKEEDHRAKGLGME------NIGGIFVVLICGL-IIAVFVAVMEFIWSTR 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 14/73 (19%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:473866 80/429 (19%)

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