DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Grik2

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_011241422.1 Gene:Grik2 / 14806 MGIID:95815 Length:943 Species:Mus musculus


Alignment Length:712 Identity:135/712 - (18%)
Similarity:236/712 - (33%) Gaps:236/712 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTSLLNFESMKYI------------GAQTQAASINHHVAQALRVFIEDFYQRIAPAFIVVLSCRR 55
            |:|::...||:.:            |..|..|::.:.....:.|.::.|.|....:    |.|.|
Mouse   289 VSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSS----LQCNR 349

  Fly    56 PSPMNFYRNIMQLLYESVDTMIVQLVLVELGRPRRIAGPRTHNLLLVDSLDAL------LDIEIH 114
            ..|..|....|.|:.|:...          |...||...:|:.|.....||.:      |: :|.
Mouse   350 HKPWRFGTRFMSLIKEAHWE----------GLTGRITFNKTNGLRTDFDLDVISLKEEGLE-KIG 403

  Fly   115 TYTAQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRHQLINCNVMTQSSGGQVLLHTYFPYAPGQ 179
            |:...|..:                                   ||:|..|:          |..
Mouse   404 TWDPSSGLN-----------------------------------MTESQKGK----------PAN 423

  Fly   180 CNDSQPTRINMFLGESWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRG---LEG-- 239
            ..||                         |:...|||......|::...:..:.|.|   .||  
Mouse   424 ITDS-------------------------LSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYC 463

  Fly   240 -RLLQELSRRMNFSIQFS-------GLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKRIQY 296
             .||:|||..:.|:.:..       |.||.:..:.....::|:.......:|.|||.|||:::  
Mouse   464 IDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKV-- 526

  Fly   297 ATNLTPVFPHYSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXRGA 358
             .:.:..|     ..:| .:|....|.|:..::||  |.....|:.::.::|.:||:..:. |.:
Mouse   527 -IDFSKPF-----MTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARQS 585

  Fly   359 -------------------------GDRLALVL-AVYAASLGLPIDP------------------ 379
                                     ...:.|.| :.|......|.:|                  
Mouse   586 KFSWFKYPNCSHYHHSQRCLCTQHLESYMELCLFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFG 650

  Fly   380 ------------PERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDL---THG 429
                        |:..|.:::...|..|.||:.|.|:|.|...|.....:....:..||   |..
Mouse   651 VGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKI 715

  Fly   430 DYAAVMGRTTLQDLREVP-SLQDLLGL------KSVIVTSERE--EEVLRTLDRCTLREGAGSHP 485
            :|.||....|:...::.. |..|.:..      :||:|.|..|  :.|| |.|...|.|   |..
Mouse   716 EYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVL-TSDYAFLME---STT 776

  Fly   486 LFFGLISQDALLHLTQ-------RGHRAGAYHIIPQDVLEQQLAIYLQKHSHLASHLDHLVMSIR 543
            :.|  ::| ...:|||       :|:..|.....|          |..|       :...::.::
Mouse   777 IEF--VTQ-RNCNLTQIGGLIDSKGYGVGTPMGSP----------YRDK-------ITIAILQLQ 821

  Fly   544 SVGLVHHWAGQMASERYFRSRFLYREK-----RIRQPDLWAVYILTAGLYLLSLVVFICELL 600
            ..|.:|     |..|:::|......|:     .:...::..::|:.|...:||:.|.:.|.|
Mouse   822 EEGKLH-----MMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFL 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
Grik2XP_011241422.1 PBP1_iGluR_Kainate 37..414 CDD:380605 29/174 (17%)
Periplasmic_Binding_Protein_Type_2 430..835 CDD:389745 89/441 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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