DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and Gria2

DIOPT Version :10

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001344853.2 Gene:Gria2 / 14800 MGIID:95809 Length:901 Species:Mus musculus


Alignment Length:547 Identity:98/547 - (17%)
Similarity:172/547 - (31%) Gaps:180/547 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVLSCRRPSPMNFYRNIMQLLYESVDTMIV--------QLVLVELG------RPRRIAGPRTHNL 99
            |:|.|.|..           :.:.||.:|.        ..::..||      ...:..|......
Mouse   207 VILDCERDK-----------VNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKIQFGGANVSGF 260

  Fly   100 LLVDSLDALLDIEIHTYT---------AQSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRH---Q 152
            .:||..|:|:...|..::         |.:.|.:|        .:.:.:|...|....:|:   |
Mouse   261 QIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKY--------TSALTYDAVQVMTEAFRNLRKQ 317

  Fly   153 LINCNVMTQSSGGQVLLHTYFPYAPG----------QCN--------DSQPTRINMFLG------ 193
            .|  .:..:.:.|..|.:...|:..|          |..        |....|||..:.      
Mouse   318 RI--EISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKT 380

  Fly   194 ------ESWKHRD-------YFPS--KLHNLNGCPLIVLARKVSPFL------DLDEGQRELRGL 237
                  ..|...|       ..||  ....|....::|.....||::      ::.||.....|.
Mouse   381 NGPRKIGYWSEVDKMVVTLTELPSGNDTSGLENKTVVVTTILESPYVMMKKNHEMLEGNERYEGY 445

  Fly   238 EGRLLQELSRRMNFSIQFSGLQD---QLKNRTTWTEKQLLQKLVQER----IAHLAIGYVRKR-I 294
            ...|..|:::...|..:.:.:.|   ..::..|.....::.:||..:    ||.|.|..||:. |
Mouse   446 CVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVI 510

  Fly   295 QYATNLTPVFPHYSNRVVGCLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXR- 356
            .::.      |..|..:  .:::.....:...::||  |.....|:|:||:::.:|.:..|. | 
Mouse   511 DFSK------PFMSLGI--SIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRF 567

  Fly   357 -------------------------GAGDRLALVLAVYAASLGLPIDPPERPSLQLLFASWLIFG 396
                                     |..:.|...|..:... |..|. |...|.:::...|..|.
Mouse   568 SPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQ-GCDIS-PRSLSGRIVGGVWWFFT 630

  Fly   397 LIVRSMYSALLFFILRYHLHQRLPGNLQDLTHGDYAAVMGRTTLQDLREVPSLQDLLGLKSVIVT 461
            ||:.|.|:|.|...|                          |..:.:..:.|.:||         
Mouse   631 LIIISSYTANLAAFL--------------------------TVERMVSPIESAEDL--------- 660

  Fly   462 SEREEEVLRTLDRCTLREGAGSHPLFF 488
            |::.|....|||       :||...||
Mouse   661 SKQTEIAYGTLD-------SGSTKEFF 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
Gria2NP_001344853.2 PBP1_iGluR_AMPA_GluR2 28..398 CDD:380612 34/211 (16%)
PBP2_iGluR_AMPA 413..794 CDD:270433 61/320 (19%)

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