DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7g and grik4

DIOPT Version :9

Sequence 1:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_031761990.1 Gene:grik4 / 100490768 XenbaseID:XB-GENE-1011875 Length:962 Species:Xenopus tropicalis


Alignment Length:517 Identity:110/517 - (21%)
Similarity:185/517 - (35%) Gaps:159/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 GESWKHRDYFPSKLHNLNGCPLIVLA----RKVSPFLDLDEGQRELRG---LEG---RLLQELSR 247
            |.:...|.:.|:....|....|||..    .:.:|:|.|....:||.|   .||   .:|:||:.
 Frog   396 GLNMDKRYFSPNASDTLVNKTLIVTTILFFLQENPYLMLKANHQELEGNDRYEGFCVDMLKELAA 460

  Fly   248 --RMNFSIQF--SGLQDQLKNRTTWTEK--QLLQKLVQERIAHLAIGYVRKRIQYATNLTPVFPH 306
              |.|:.|:.  .|:....:...|||..  :|:.:.....:|.|.|...|:::   .:.:..|  
 Frog   461 ILRFNYKIRLVADGVYGVPELNGTWTGMVGELISRKADLAVAGLTITAEREKV---IDFSKPF-- 520

  Fly   307 YSNRVVG-CLLLNAHNLTSLEIWSF--PFQALTWICLVFSFLSISCLALLHXR-----------G 357
               ..:| .:|...|.......:||  ||....|:.::.::|::||:..|..|           .
 Frog   521 ---MTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPC 582

  Fly   358 AGDRLALVLAVYAA--SLGLPID---------PPERPSLQLLFASWLIFGLIVRSMYSALLFFIL 411
            |..|..|::..|:.  ||..|:.         .|...|.:.:...|..|.||:.|.|:|.|...|
 Frog   583 AQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFL 647

  Fly   412 RYHLHQRLP------GNLQDLTHGDYAAVMG---RTTLQDLR---------EVPSLQDLLGLKSV 458
            ..   ||:.      .:|.|.|..:|..:.|   .|..|:.|         .:.|.|..:.:||.
 Frog   648 TV---QRMDVPIESVDDLADQTTIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMHSKQPSVFVKST 709

  Fly   459 IVTSEREEEVLRTLD------------------RCTLREGAGSHPLFFGLISQDALLHLTQRGHR 505
                  ||.:.|.|:                  .|.|.:..|.               |..:|:.
 Frog   710 ------EEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQVGGL---------------LDTKGYG 753

  Fly   506 AGAYHIIP-----QDVLEQQLAI-YLQKHSHLASHLDHLVMSIRSVGLVHHW--AGQMASERYFR 562
            .|    :|     :|  |..||| .||:::.|..             |...|  .|:...|...|
 Frog   754 IG----MPVGSAFRD--EFDLAILQLQENNCLED-------------LKRKWWDGGKCPKEEDHR 799

  Fly   563 SRFLYREKRIRQPDLWAVY-ILTAGLYLLSLV----------------VFICELLASRRAGL 607
            ::.|..|      ::..:: :|..||.:..|:                |.:|:.:||..:.:
 Frog   800 AKGLGME------NIGGIFVVLICGLIVAILIAMLEFLWTVRNAEDSEVSVCQEMASELSSI 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7gNP_001368933.1 None
grik4XP_031761990.1 Periplasmic_Binding_Protein_type1 23..400 CDD:415822 1/3 (33%)
PBP2_iGluR_kainate_KA1 414..788 CDD:270442 93/424 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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