DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:422 Identity:80/422 - (18%)
Similarity:159/422 - (37%) Gaps:76/422 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 VATFEHRPYVIIEDDPKTPGGRSIHGIEGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGI 282
            |.|.:..||.:.:       |..:.|....:..:::.::.|...:...||...|:....||:.|:
Zfish    27 VTTIKEEPYAMSK-------GSELEGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGM 84

  Fly   283 LKMMVDGEVNLTFVCFMYSKARSDLMLPSTSY--TSFPIVLVVPSGGSISPMGRLTRPFRYIIWS 345
            :..:|.||.::.......:..|..::..|..:  |....::....|...|....|.:.|...:|.
Zfish    85 IGEVVRGEADIAVAPLTLTAQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFSTEMWM 149

  Fly   346 CILVSLIFGFVLICLLKITAL-------PGLRNLVLGRRNRLPFMGMWASLLGGLALY----NPQ 399
            .:||:.:  ...||:..::.:       |...|      |.......:...:|.|.|.    :|:
Zfish   150 GVLVAYL--LTSICIFLVSRISPCEWEQPEKDN------NSFTLSHSFWYTVGALTLQGAGPHPK 206

  Fly   400 RNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEVLAKD-YEFRIL--PALRTIF 461
            ....|.|..:|.:.:|:|.|.|...|.|.|.....:..||:..::..:: .|:..:  .:....|
Zfish   207 ALSGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFF 271

  Fly   462 KDSMPTTNFHAV-----------LSLEESLYRLRDEDDPGITVAL-LQPTVNQFDFRSGPNKRHL 514
            |:|...| :|.:           |:..|...|.:..:...|..:: |...|.::        .:|
Zfish   272 KNSNNPT-YHRIYEHIKEAQSYSLNAAEGFRRAQKGNYAFIGESVSLDLAVARY--------CNL 327

  Fly   515 TVLPDPL------MTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRKMY--MDRIKRVSKRR 571
            |..|:.:      :.|||      .|...:.:...|:.:..||.:..:|..:  ...:.:.||..
Zfish   328 TRAPEIIGMRGYSIAAPL------GSPLIKNLSVAILRLSESGELDYFRSKWWASSCVAKDSKGA 386

  Fly   572 NLEPKPLSIWRLSGIFVCCA-----GLYLVAL 598
            .|:|.     .|.|:|:..|     |::|..:
Zfish   387 PLKPA-----SLKGVFLLLAFGLGLGIFLALM 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 11/61 (18%)
Lig_chan 343..593 CDD:278489 55/288 (19%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 70/377 (19%)
Lig_chan 146..396 CDD:278489 52/277 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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