DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and grin3a

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_073770471.1 Gene:grin3a / 564832 ZFINID:ZDB-GENE-130530-780 Length:1117 Species:Danio rerio


Alignment Length:507 Identity:102/507 - (20%)
Similarity:185/507 - (36%) Gaps:107/507 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 LFPRKLTNMHGCE---------MVVATFEHRPYVI---IEDDPKTPGGR---------------S 240
            ::|.|..:..|.:         .||...|| |:|.   ::|:...|.|:               .
Zfish   500 VWPNKRRSQPGADWRHSSRLHLRVVTLVEH-PFVFTRDVDDEGLCPAGQLCLDPLTNDTALLESL 563

  Fly   241 IHGIEGL------------------IFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMV 287
            ..|::|.                  :...|||.|.|...|....|...| ...:|.:||::..::
Zfish   564 FQGLQGANDTVPLEFKKCCYGYCIDLLEKLAEDMGFDFDLYIVGDGKYG-AYKNGRWTGLVGDLM 627

  Fly   288 DGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLVVPSGGSISPMGRLTRPFRYIIWSCILVSLI 352
            .|..:|....|..:.|||.::..::.:.|..:.::|.:..:.:|:|....|..:.:|..|.|||.
Zfish   628 SGAAHLAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLH 692

  Fly   353 FGFVLICLLKITALPGLRNLVLGRRNRLPFMG----MWASLLGGLALYNPQRNF-ARYILVMWLL 412
            ...|.:.|.:..:..|:......|.....|..    .:|.|.|..|...|.:.: .|:::.:|.:
Zfish   693 VTAVFLTLYEWKSPFGMTPRGRNRDRVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAI 757

  Fly   413 QTLILRAAYTGQLYLL------------LQDVEMRSPIK-----SLSEVLAKDYEFRILPALRTI 460
            ..|...:.||..|..:            :.|.::..|.:     ::.|..|:||..:..|.:...
Zfish   758 FCLFCLSTYTANLAAVMVGEKTYEQLSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEY 822

  Fly   461 FKD-SMPTTNFHAVLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLMTA 524
            .:. :.|||        .:.:..|:| |...:...::...:..::.....:.:.||| ..|....
Zfish   823 MRRYNAPTT--------PDGIDHLKD-DPQKLDAFIMDKALLDYEVSIDADCKMLTV-GKPFAIE 877

  Fly   525 PLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRKMYMDRIKRV---SKR--RNLEPKPLSIWRLS 584
            .....::.:|.....|..|:....|.|    :..|..|:..:|   .||  ...|...:.|...|
Zfish   878 GYGIGLKQNSPLTSNISELVSQYKSDG----FMDMLHDKWYKVVPCGKRSFAVTETLQMGIKHFS 938

  Fly   585 GIFV-CCAGLYLVALIVFILEIL----------TTNHR-------RLRRAFN 618
            |:|| .|.|:.|..|......|:          :|.|:       ||.||.|
Zfish   939 GLFVMLCVGVALSLLTTLGEHIVHRWVIPRMQESTEHKYWLHTSQRLHRALN 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 18/97 (19%)
Lig_chan 343..592 CDD:459656 55/277 (20%)
grin3aXP_073770471.1 None

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