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Protein Alignment Ir7c and Gria3

DIOPT Version :9

Sequence 1:	NP_001245572.1	Gene:	Ir7c / 31692	FlyBaseID:	FBgn0029966	Length:	625	Species:	Drosophila melanogaster
Sequence 2:	NP_001268858.2	Gene:	Gria3 / 53623	MGIID:	95810	Length:	888	Species:	Mus musculus

Alignment Length:	498	Identity:	98/498 - (19%)
Similarity:	180/498 - (36%)	Gaps:	130/498 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   216 MVVATFEHRPYVIIEDDPKTPGGRSIHGIEGL---IFRSLAERMNFTIKLVEQKDKNRGEILPDG 277
            :||.|....|||:.:.:.:...|...:  ||.   :...:|:.:....||         .|:.||
Mouse   419 IVVTTILESPYVMYKKNHEQLEGNERY--EGYCVDLAYEIAKHVRIKYKL---------SIVGDG 472

  Fly   278 NF----------TGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLVVPSGGSISP- 331
            .:          .|::..:|.|..::.......:..|.:::..|..:.|..|.:::.......|
Mouse   473 KYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 537

  Fly   332 MGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLP--------------- 381
            :.....|..|.||.||:.:.| |..::..|.....|  ....|...|..|
Mouse   538 VFSFLDPLAYEIWMCIVFAYI-GVSVVLFLVSRFSP--YEWHLEDNNEEPRDPQSPPDPPNEFGI 599

  Fly   382 FMGMWASLLGGLAL-----YNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSL 441
            |..:|.||  |..:     .:|:....|.:..:|...|||:.::||..|...|....|.|||:|
Mouse   600 FNSLWFSL--GAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES- 661

  Fly   442 SEVLAKDYEFRILPALRTIFKDSMPTTNF--HAVLSLEESLYRLRDEDDPGI---TVA------- 494
            :|.|||..|.    |..|:  ||..|..|  .:.:::.|.::......:|.:   |.|
Mouse   662 AEDLAKQTEI----AYGTL--DSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVR 720

  Fly   495 --------LLQPTVNQFDFRSGP-----------NKRHLTVLPDPLMTAPLTFYMRPHSYFKRRI 540
                    ||:.|:|::..:..|           :|.:....|             ..|..:..:
Mouse   721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATP-------------KGSALRTPV 772

  Fly   541 DRLIMAMMSSGIVARYR-KMYMDRIKRVSKRRNLEPK--PLSIWRLSGIFVCCAGLYLVALIVFI 602
            :..::.:...||:.:.: |.:.|:.:..:|....:.|  .||:..::|:|....|...:|::|.:
Mouse   773 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVAL 837

  Fly   603 LEIL--------------------------TTNHRRLRRAFNV 619
            :|..                          |.|:...|..:||
Mouse   838 IEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNV 880

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.