DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and CG11155

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:735 Identity:141/735 - (19%)
Similarity:257/735 - (34%) Gaps:191/735 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VSLVYALVWAIDNYYGMATSTPLAVVQFPTSRESRRLHNDLIDAALGRSSGTGRIQFLLEDDRVE 73
            |:::|...:.:.|....:|.|...:.....|.:|.|                 ::...:....:.
  Fly   175 VAIIYEEDYGLFNLMHSSTETKAEMYIRQASPDSYR-----------------QVLRAIRQKEIY 222

  Fly    74 MTETDTDPPPPSGLTGRPIAIWFLDSLRSYFR--LEMYLNQLGSPYKRNGFFLVIYTGLEDQPME 136
            ....||:|                ..::|:||  |::.:|.....|....|.|..| .|||....
  Fly   223 KIIVDTNP----------------SHIKSFFRSILQLQMNDHRYHYMFTTFDLETY-DLEDFRYN 270

  Fly   137 SLKIMFRRLLN------MYVLNVNVFLQRDG--TVHLYTYYPYGPHHCQSSLPVYYTAFQDLAAP 193
            |:.|...||::      :.|:|....||.:|  |::...|.     ..:|:|     .|..:.|.
  Fly   271 SVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYI-----QTESAL-----MFDSVYAF 325

  Fly   194 ANGF----------------------------------------GLT---------KPLFPRKL- 208
            |||.                                        |||         :.:|...: 
  Fly   326 ANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDIL 390

  Fly   209 -----------------------------TNMHGCEMVVATFEHRPYVIIEDDPKTPGGRSIHGI 244
                                         :|:....:||.|.|.||||::::|....|.....|.
  Fly   391 KLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTGNLRFEGF 455

  Fly   245 EGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGN-FTGILKMMVDGEVNLTFVCFMYSKARSDLM 308
            ...:.:::|.::.|..|:....|...|..:|:.| :.||::.:::...:|.......:.||..::
  Fly   456 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVI 520

  Fly   309 LPSTSYTSFPIVLVVPSGGSISPMGRLTRPFRYI------IWSCILVS-LIFGFVLICLLKITAL 366
            ..:..:.:..|.::..     .|..:.||.|.::      ||..:|.: ::..|.|..:.:.:..
  Fly   521 DFTKPFMNLGIGILFK-----VPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPY 580

  Fly   367 ------PGLRNLVLGRRNRLPFMGMW----ASLLGGLALYNPQRNFARYILVMWLLQTLILRAAY 421
                  |..:...:...........|    ..|..|..| ||:....|.:...|....||:.::|
  Fly   581 EWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGL-NPKATSTRIVGGCWFFFCLIIISSY 644

  Fly   422 TGQLYLLLQDVEMRSPIKSLSEVLAKDYE--FRILP--ALRTIFKDS--------------MPTT 468
            |..|...|....|.|||:|.|: ||:..|  :..|.  :..|.|:||              ..|.
  Fly   645 TANLAAFLTVERMISPIESASD-LAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTA 708

  Fly   469 NFHAVLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLMTAPLTFYMRPH 533
            .|  |.:.|:.:.|:.:    |....|::.|:..:..:...|   ||.:...|.:..........
  Fly   709 VF--VKTYEDGIKRVME----GSYAFLMESTMLDYAVQRDCN---LTQIGGLLDSKGYGIATPKG 764

  Fly   534 SYFKRRIDRLIMAMMSSGIVA----RYRKMYMDRIKRVSKRRNLEPKPLSIWRLSGIF-VCCAGL 593
            |.::.:|...|:.:...||:.    ::.|...|...|..|.:..:...|.:..:.|:| |...||
  Fly   765 SPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGL 829

  Fly   594 YLVALIVFILEILTTNHRRL 613
            .| |::|.|.|....:.:.|
  Fly   830 AL-AVVVAIFEFCWNSRKNL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 15/62 (24%)
Lig_chan 343..593 CDD:278489 59/283 (21%)
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 45/278 (16%)
ANF_receptor 61..393 CDD:279440 45/261 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 79/384 (21%)
Lig_chan 555..829 CDD:278489 59/284 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463062
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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