Sequence 1: | NP_001245572.1 | Gene: | Ir7c / 31692 | FlyBaseID: | FBgn0029966 | Length: | 625 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
Alignment Length: | 467 | Identity: | 90/467 - (19%) |
---|---|---|---|
Similarity: | 174/467 - (37%) | Gaps: | 99/467 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 217 VVATFEHRPYVIIEDDPKTPGGRSIHG---IEGLIFRSLAERM------NFTIKLVEQKDKNRG- 271
Fly 272 --EILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLVVPSGGSISP-MG 333
Fly 334 RLTRPFRYIIWSCILVSLI-FGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWASLLGGLALYN 397
Fly 398 PQRNF----------------------------------ARYILVMWLLQTLILRAAYTGQLYLL 428
Fly 429 LQDVEMRSPIKSLSE------------VLAKDYEF--RILPALRTIFKDSMPTTNFHAVLSLEES 479
Fly 480 LYRLRDEDDPGITVALLQPTVNQF--------DFRSGPN---KRHLTVLPDPLMTAPLTFYMRPH 533
Fly 534 SYFKRRIDRLIMAMMSSGIVARYR-KMYMDRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVA 597
Fly 598 LIVFILEILTTN 609 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir7c | NP_001245572.1 | Lig_chan-Glu_bd | 225..287 | CDD:214911 | 18/73 (25%) |
Lig_chan | 343..593 | CDD:278489 | 57/310 (18%) | ||
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | |
ANF_receptor | 53..434 | CDD:279440 | |||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 77/422 (18%) | ||
Lig_chan | 612..907 | CDD:278489 | 58/312 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462551 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |