DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7c and Ir56d

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:656 Identity:123/656 - (18%)
Similarity:212/656 - (32%) Gaps:231/656 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GTGRIQFLLEDDRVEMTETDTDPPPPSGLTGRPIAIWFLDSLRSYFRLEMYLNQLGSPYKRNGFF 123
            |...:||:.....|.:..|..|.|              :..|.|:       ||.|..:.:..| 
  Fly    89 GIPMMQFISTPSLVMVFTTGKDDP--------------IMELASH-------NQQGIHWLKTIF- 131

  Fly   124 LVIYTGLEDQPMES-----------LKIMF-----RRLLNMYVLNV--NVFLQRDGTVHLYTYYP 170
             |::..|:.:..|:           :|.::     ::.:|.:::.:  |||:             
  Fly   132 -VLFPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIKDNVFI------------- 182

  Fly   171 YGPHHCQSSLPVYYTAFQDLAAPA----NGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIED 231
                     |..|.|       |:    .|....:..|.:...||.|..:........|.|...|
  Fly   183 ---------LDPYPT-------PSIVNKTGVWQAEEFFHKYAKNMKGYLVRTPILYDMPRVFKSD 231

  Fly   232 DPKTPGGRS-IHGIEGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDG------ 289
            .|.....:: |||..|.:|....|.:|.|  |::.......:.|   |.|.:|.::..|      
  Fly   232 RPTNRYEKNFIHGTSGNLFLGFLEFVNAT--LMDTSANVTADYL---NMTNLLDLVSQGVYETLI 291

  Fly   290 ----EVNLTFVCFMYSKARSDLMLPSTSYTSFPI-----VLVVPSGGSISPMGR-LTRPFRYIIW 344
                |:...||               .|| |:||     .::||.... ||..: :....:..:|
  Fly   292 HSFTEITTKFV---------------VSY-SYPIGINDCCIMVPYRNQ-SPADQYMHEALQENVW 339

  Fly   345 SCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWASLLGGLALYNPQRNFARYILVM 409
              :|:||...::.:.:...:.|          |.|    .:.|:.|..:....       |.:..
  Fly   340 --VLISLFTLYITVAIYLCSPL----------RPR----DLSAAFLQSICTLT-------YSVPT 381

  Fly   410 WLLQTLILRAAY-----------TGQLYL-----------------LLQD-VEMRSPIKSLSEVL 445
            ::::|..||..|           |..||:                 .:|| ||....||    :|
  Fly   382 FIIRTPTLRMRYLYILLAIWGIVTSNLYISRMTSYFTTAPPVRQINTVQDVVEANLRIK----ML 442

  Fly   446 AKDYEFRILPALRTIFKDSMPTTNFHAVLSLEESLYRLRDEDDP-----GITVA----------- 494
            |.:||......|:      .|.:..:.|..:::.:..|  ..||     |.||:           
  Fly   443 AIEYERMAKSPLQ------YPESYLNQVDLVDKHMLDL--HRDPFNTSFGYTVSSDRWRFLNLQQ 499

  Fly   495 --LLQPTVNQFDFRSGPNKRHLTVLPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARY- 556
              |.:|.....:...||......:..|..|.:.:|.|              ||....:|::..: 
  Fly   500 LHLRKPIFRLTEICEGPFYHVFPLHKDSHMRSVMTEY--------------IMIAQQAGLMNHWE 550

  Fly   557 RKMYMDRIKRVSKRRNL---EPKPLSI---------WRLSGIFVCCAGLYLVALIVFILEILTTN 609
            |:.:.:.:.......:|   ||..||:         |.|        ||.|..| .|..|:....
  Fly   551 RETFWEAVHLHRIHVHLFDDEPMALSLDFFSSLLRTWTL--------GLILAGL-AFAAEMKWHE 606

  Fly   610 HRRLRR 615
            |...:|
  Fly   607 HVTFKR 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 17/62 (27%)
Lig_chan 343..593 CDD:278489 55/309 (18%)
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 21/133 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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