DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7c and Ir8a

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:567 Identity:112/567 - (19%)
Similarity:190/567 - (33%) Gaps:175/567 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 VHLYTYYPYGP--HHCQSSL--PV------------YYT----AFQDLAA--------------- 192
            ||...:..|.|  .|.|...  ||            ||:    |..||||               
  Fly   316 VHWSNFLAYAPPLPHIQDQFQSPVPGLTFAVNISAGYYSSEHEAKTDLAAWSSVGEMRLLNETIS 380

  Fly   193 PANGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIEDDPKTPGGRSIHGIEGL---------- 247
            ||..|                  ..:.|.|..|:..:..:..|  |..|....||          
  Fly   381 PARRF------------------FRIGTAESIPWSYLRREEGT--GELIRDRSGLPIWEGYCIDF 425

  Fly   248 IFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCF-MYSKARS--DLML 309
            |.| |::::||..::|..:..:.||:...|.:.|::..:|.||.:...... |||:...  |.:.
  Fly   426 IIR-LSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKMYSEREEVIDFLP 489

  Fly   310 PSTSYTSFPIVLVVPSGGSISPMGRLTRPFRYI------IWSCILVSLIFGFVLICLLKITALPG 368
            |....|...|.:..|.        |.|..|:::      :|..|:.:|:...::|..:...:...
  Fly   490 PYYEQTGISIAIRKPV--------RRTSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDKYSPYS 546

  Fly   369 LRNLVLGRRNRLPFM--------GMWASLL------GGLALYNPQRNFARYILVMWLLQTLILRA 419
            .||    .|...|:.        ..|.:|.      ||.|   |:....|.::..:.|..:::.|
  Fly   547 SRN----NRQAYPYACREFTLRESFWFALTSFTPQGGGEA---PKAISGRMLVAAYWLFVVLMLA 604

  Fly   420 AYTGQLYLLLQDVEMRSPIKSLSEVLAKDYEFRILPALRTIFKDSMPTTNFHAVLSLEESLYRLR 484
            .:|..|...|....|::|::|| |.||:......     |:.|||.....|..:...|::|||:.
  Fly   605 TFTANLAAFLTVERMQTPVQSL-EQLARQSRINY-----TVVKDSDTHQYFVNMKFAEDTLYRMW 663

  Fly   485 DE---------------DDP------GITVAL--LQPTVNQFDFRSG------------------ 508
            .|               |.|      .|.:|:  .||..   |.:.|                  
  Fly   664 KELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVA---DAKEGFANVDAHENADYAFIHDS 725

  Fly   509 -------PNKRHLTVLPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRKMYMDRIKR 566
                   ....:||.:.:.....|....::..|:....:...|:.:.........:..|.:    
  Fly   726 AEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWN---- 786

  Fly   567 VSKRRNLEPKPLS-------IWRLSGIFVCCAGLYLVALIVFILEIL 606
               :.||...|||       :..|.|:|:......::|::...:|:|
  Fly   787 ---QSNLPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVL 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 16/71 (23%)
Lig_chan 343..593 CDD:278489 59/318 (19%)
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 84/447 (19%)
Lig_chan 520..818 CDD:278489 59/320 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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