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Protein Alignment Ir7c and Grik1

DIOPT Version :9

Sequence 1:	NP_001245572.1	Gene:	Ir7c / 31692	FlyBaseID:	FBgn0029966	Length:	625	Species:	Drosophila melanogaster
Sequence 2:	NP_001104587.1	Gene:	Grik1 / 29559	RGDID:	2732	Length:	949	Species:	Rattus norvegicus

Alignment Length:	443	Identity:	99/443 - (22%)
Similarity:	170/443 - (38%)	Gaps:	85/443 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   216 MVVATFEHRPYVIIEDDPKTPGGRSIHGIEGLIFRSLAERMN-----FTIKLV------EQKDKN 269
            ::|.|....|||:.....|...|..  ..||.....|.|..|     :.:|||      .|.||
  Rat   449 LIVTTILEEPYVMYRKSDKPLYGND--RFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK- 510

  Fly   270 RGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLVV--PSG---GSI 329
                   |.:.|::|.::|...:|.......:..|..::..|..:.:..|.::.  |:|   |..
  Rat   511 -------GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 568

  Fly   330 SPMGRLTRP-FRYIIWSCILVSLIFGFVLICLLKITALPGL-------------RNLVLGRRNRL 380
            |.:..|:.. :.|::.:|:.||.    ||..:.:.|.....             .|..|  .|..
  Rat   569 SFLNPLSPDIWMYVLLACLGVSC----VLFVIARFTPYEWYNPHPCNPDSDVVENNFTL--LNSF 627

  Fly   381 PFMGMWASLLGGLALYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEVL 445
            .| |:.|.:..|..|. |:....|.:..:|...|||:.::||..|...|....|.|||.|..: |
  Rat   628 WF-GVGALMQQGSELM-PKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD-L 689

  Fly   446 AKDYEFRILPALR-----TIFKDSMPTT--NFHAVLSLEESLYRLRDEDDPGIT-------VALL 496
            ||..:.. ..|:|     |.||.|..:|  ...|.:|..:....:::.|: ||.       ..|:
  Rat   690 AKQTKIE-YGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDE-GIQRVLTTDYALLM 752

  Fly   497 QPTVNQFDFRSGPNKRHLTVLPDPL---MTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRK 558
            :.|..::..:...|...:..|.|..   :..|:      .|.::.:|...|:.:...|      |
  Rat   753 ESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPI------GSPYRDKITIAILQLQEEG------K 805

  Fly   559 MYMDRIK-----RVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFILEIL 606
            ::|.:.|     ...:..:.|...|.:..:.|||:..|...::::.|.|.|.|
  Rat   806 LHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFL 858

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.