DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and GRID2

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens


Alignment Length:303 Identity:68/303 - (22%)
Similarity:116/303 - (38%) Gaps:57/303 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GLTKPLFPRKL-TNMHGCEMVVATFEHRPYVIIEDD----PKTPGGRSIHGIEGLIFRSLAERMN 257
            ||...|..:|| .||.|..:.|.|....|:|::.::    ||...|.||.     :..:|:..:.
Human   452 GLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSID-----VLDALSNYLG 511

  Fly   258 FTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLV 322
            |..::....|...|....||.:.|::..:|....::.......:..|.:::..:|.|..:.:.::
Human   512 FNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVL 576

  Fly   323 VPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWA 387
            :........|.....||...:|:||..:::...:|:.||.....|.|:            ||...
Human   577 LRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQ------------MGSMT 629

  Fly   388 SLLGGLALYN----------------PQRNFA-RYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            |    ..|||                |....| |.::..|.|..||:.::||..|...|....:.
Human   630 S----TTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIE 690

  Fly   436 SPIKSLSEVLAKD-------------YEFRILPALRTIFKDSM 465
            |.|:||.: |:|.             ||...:..|....:|||
Human   691 SSIQSLQD-LSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSM 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 14/65 (22%)
Lig_chan 343..592 CDD:459656 37/153 (24%)
GRID2XP_011530195.2 Periplasmic_Binding_Protein_type1 92..457 CDD:471960 2/4 (50%)
PBP2_iGluR_delta_2 468..834 CDD:270449 61/287 (21%)

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