Sequence 1: | NP_001245572.1 | Gene: | Ir7c / 31692 | FlyBaseID: | FBgn0029966 | Length: | 625 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579842.2 | Gene: | Grin3b / 170796 | RGDID: | 621705 | Length: | 1002 | Species: | Rattus norvegicus |
Alignment Length: | 738 | Identity: | 145/738 - (19%) |
---|---|---|---|
Similarity: | 257/738 - (34%) | Gaps: | 228/738 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 ALVWAIDNYYGMATSTPLAVVQFPTSRESRRLHNDLIDAALGRSSGTGRIQFLLEDDRVEMTETD 78
Fly 79 TDPPPPSGLTGRPIAIWFLDSLRSYFRLEMYLNQLGSPYKRNGFFLVIYTGLE--DQPMESLKIM 141
Fly 142 F-RRLLNMYVLNVN-----------------------------VFLQRDGTVHLYTYY------- 169
Fly 170 -PYGPHHCQSSLPVYYT--AFQD-----------LAAPANGFGLTKPLFPRKLTNMHGCEMVVAT 220
Fly 221 FEHRPYVII---EDDPKTPGG-------------------------------RSIHGIEGLIFRS 251
Fly 252 LAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTS 316
Fly 317 FPIVLVVPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGL------RNLVLG 375
Fly 376 RRNRLPFMGMWASLLG-GLALYNPQRNFARYILVMWLLQTLILRAAYTGQLYLL----------- 428
Fly 429 -LQDVEMRSPIK-----SLSEVLAKDYEFRILPALRT-IFKDSMPTTNFHAVLSLEESLYRLRDE 486
Fly 487 DDPGITVALLQPTVNQFDFRSGPNKRHLTV------------LPDPLMTAPLTFYMRPHSYFKRR 539
Fly 540 IDRLIMAMMSSGIV----ARYRKMYM--DRIKRVSKRRNLEPKPLSIWRLSGIFV-CCAGLYLVA 597
Fly 598 LI-----VFILEILTTNHRRLRR 615 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir7c | NP_001245572.1 | Lig_chan-Glu_bd | 225..287 | CDD:214911 | 19/95 (20%) |
Lig_chan | 343..593 | CDD:278489 | 55/293 (19%) | ||
Grin3b | NP_579842.2 | PBP1_iGluR_NMDA_NR3 | 21..405 | CDD:107372 | 43/230 (19%) |
PBP2_iGluR_NMDA_Nr3 | 414..808 | CDD:270438 | 82/430 (19%) | ||
Lig_chan | 576..842 | CDD:278489 | 55/294 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 882..910 | ||||
Involved in the trafficking and surface expression of NMDARs. /evidence=ECO:0000250 | 951..984 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350125 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |