DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and Grin2d

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_036008580.1 Gene:Grin2d / 14814 MGIID:95823 Length:1345 Species:Mus musculus


Alignment Length:683 Identity:136/683 - (19%)
Similarity:235/683 - (34%) Gaps:191/683 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SGLTGRPIAIWFLDSLR------SYFRLEMYLNQLGSPYKRNGFFLVIYTGLEDQPMESLKIMFR 143
            :|||| |..:||:...:      |....|..|...|:|... |.|.|...|..|.       :.|
Mouse   265 AGLTG-PGYVWFMVGPQLAGGGGSGVPGEPLLLPGGAPLPA-GLFAVRSAGWRDD-------LAR 320

  Fly   144 RLLNMYVLNVNVF------LQRDGTVHLYTYYPYGPHHCQS--------SLPVYYTAF----QDL 190
            |:    ...|.|.      |.||     |.:.|...|.|::        ||..|:...    :|.
Mouse   321 RV----AAGVAVVARGAQALLRD-----YGFLPELGHDCRAQNRTHRGESLHRYFMNITWDNRDY 376

  Fly   191 AAPANGFGLTKPLFPRKLTNMHGCEMV--------------------------------VATFEH 223
            :...:||.:...|....||.....|:|                                |||.|.
Mouse   377 SFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLEE 441

  Fly   224 RPYVIIE----------------------------------DDPKTPGGRSIHGIEGLIFRSLAE 254
            ||:||:|                                  |.|: |..|...|....|.:.||.
Mouse   442 RPFVIVEPADPISGTCIRDSVPCRSQLNRTHSLVAPRSPPPDAPR-PEKRCCKGFCIDILKRLAH 505

  Fly   255 RMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPI 319
            .:.|:..|....:...|:.: ||.:.|::..:.....::.......::.||:::..|..:....|
Mouse   506 TIGFSYDLYLVTNGKHGKKI-DGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGI 569

  Fly   320 -VLVVPSGGSISPMGRLT----------RPFRYIIW-----SCILVSLIFGFVLICL-------- 360
             |:|..|.|::||...|.          .|:...:|     .|:.|..:..|:...|        
Mouse   570 SVMVARSNGTVSPSAFLAFAWLMPPMSPEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRS 634

  Fly   361 LKITALPGLRNLVLGRRNRLPFMGMWASLL-GGLALYNPQRNFARYILVMWLLQTLILRAAYTGQ 424
            |.....||.....:|:...|    :||.:. ..:.:.||:...::.::::|....:|..|:||..
Mouse   635 LATGKRPGGSTFTIGKSIWL----LWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTAN 695

  Fly   425 LYLLLQDVEMRSPIKSLSEVLAKDYEFRILPALRTIFKDSMPTTNFHAVL--SLEESL------- 480
            |...:...|....:..||     |.:|: .|      ::..|...|..|.  |.|:::       
Mouse   696 LAAFMIQEEYVDTVSGLS-----DRKFQ-RP------QEQYPPLKFGTVPNGSTEKNIRSNYPDM 748

  Fly   481 --YRLRDEDDPGITVALLQPTVNQFD------------FRSGPNKRHLTVLPDPLM-TAPLTFYM 530
              |.:| .:.|.:..||.|....:.|            .|.....:.:|:....:. |......:
Mouse   749 HSYMVR-YNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIAL 812

  Fly   531 RPHSYFKRRIDRLIMAMMSSGIVARYRKMYM------DRIKRVSKRRNLEPKPLSIWRLSGIFVC 589
            ...|.:||.||..::..:....:....::::      |:|:.:|.:       |.|..::|:|..
Mouse   813 HKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSK-------LDIDNMAGVFYM 870

  Fly   590 CAGLYLVALIVFILEILTTNHRRLRRAFNVINR 622
            ......::|:||..|.|.  :.|||......:|
Mouse   871 LLVAMGLSLLVFAWEHLV--YWRLRHCLGPTHR 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 18/95 (19%)
Lig_chan 343..592 CDD:459656 53/292 (18%)
Grin2dXP_036008580.1 Periplasmic_Binding_Protein_type1 <156..415 CDD:471960 39/167 (23%)
PBP2_iGluR_NMDA_Nr2 432..849 CDD:270436 81/435 (19%)

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