DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and Grid2

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_032193.1 Gene:Grid2 / 14804 MGIID:95813 Length:1007 Species:Mus musculus


Alignment Length:481 Identity:96/481 - (19%)
Similarity:171/481 - (35%) Gaps:126/481 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GLTKPLFPRKL-TNMHGCEMVVATFEHRPYVIIEDD----PKTPGGRSIHGIEGLIFRSLAERMN 257
            ||...|..:|| .||.|..:.|.|....|:|::.::    ||...|.||.     :..:|:..:.
Mouse   424 GLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSID-----VLDALSNYLG 483

  Fly   258 FTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLV 322
            |..::....|...|....||.:.|::..:|....::.......:..|.:::..:|.|..:.:.::
Mouse   484 FNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVL 548

  Fly   323 VPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWA 387
            :........|.....||...:|:||..:::...:|:.||.....|.|:            ||...
Mouse   549 LRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQ------------MGSMT 601

  Fly   388 SLLGGLALYN----------------PQRNFA-RYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            |    ..|||                |....| |.::..|.|..||:.::||..|...|....:.
Mouse   602 S----TTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIE 662

  Fly   436 SPIKSLSEVLAKD-------------YEFRILPALRTIFKDSMPTTNFHAVLSLEESLYRLRDED 487
            |.|:||.: |:|.             |:...:..|....:|||           ...::|:.:..
Mouse   663 SSIQSLQD-LSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSM-----------YSQMWRMINRS 715

  Fly   488 DPGITVALLQPTVNQFDFRSGPNK--------------RHLTVLPDPLMTAPLTFYMRPHSYFKR 538
            :....        |..:.::|..|              .....:.||    ..:||...::.   
Mouse   716 NGSEN--------NVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDP----DCSFYTVGNTV--- 765

  Fly   539 RIDRLIMAMMSSGIVARYRKMYMDRIKRVSKRRNLE-------PK-----------------PLS 579
             .||.....:..|  :.||.::..||..:.:..:::       ||                 .|.
Mouse   766 -ADRGYGIALQHG--SPYRDVFSQRILELQQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALD 827

  Fly   580 IWRLSGIF-VCCAGLYLVALIVFILE 604
            |..|:|:| :..||:.|..||. :||
Mouse   828 IKSLAGVFCILAAGIVLSCLIA-VLE 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 14/65 (22%)
Lig_chan 343..592 CDD:459656 58/317 (18%)
Grid2NP_032193.1 Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 24..345
Periplasmic_Binding_Protein_type1 28..429 CDD:471960 2/4 (50%)
PBP2_iGluR_delta_2 440..806 CDD:270449 75/416 (18%)
Interaction with AP4M1. /evidence=ECO:0000250|UniProtKB:Q63226 921..991
PDZ-binding 1005..1007
Blue background indicates that the domain is not in the aligned region.

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