DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and LOC110438919

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:714 Identity:139/714 - (19%)
Similarity:247/714 - (34%) Gaps:202/714 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLHSAVHNVSLV-YALVWAIDNYY-GMATSTPLAVVQFPTSRESRRLHNDLIDAALGRSSGTGRI 63
            ::....|:|.|. |...|.:.:.. |.|...|   .:|||...|  :..|..|..|     ..|:
Zfish    98 IIFQVAHSVGLTGYGYTWIVPSLVAGDADHIP---AEFPTGMIS--VSYDEWDYGL-----EARV 152

  Fly    64 QFLLEDDRVEMTETDT-----DPPPPSGLTGRPIAIWFLDSLRSYFRLEMYLNQLGSPYKRNGFF 123
            :     |.|.:..|.|     |..|                 .:..:.|.:    |:|.|::.. 
Zfish   153 R-----DGVAVIATATSTMMMDRGP-----------------HTLLKSECH----GAPDKKSPM- 190

  Fly   124 LVIYTGLEDQPMESLKIMFRRLLNMYVLNVNVFLQRDGTVHLYTYYP---------------YGP 173
                ||..::       :.|.|:|:.....|:....||    |..:|               .|.
Zfish   191 ----TGNNNE-------VLRYLMNVTFEGRNLSFSEDG----YQMHPKLVIILLDKERQWDRVGK 240

  Fly   174 HHCQSSLPVYYTAFQDLAAPANGFGLTKPLF-----PRKLTNMHGCEMVVATFEHRPYVIIED-D 232
            .. ..||.:.|..:              |.|     |....:.|   :.:.|.|..|:||:|| |
Zfish   241 WE-NGSLSMKYHVW--------------PRFELYSGPEAREDDH---LSIVTLEEAPFVIVEDVD 287

  Fly   233 P--------KTPGGRSIHGI--------------EGL---IFRSLAERMNFTIKLVEQKDKNRGE 272
            |        ..|..:.:..:              :|.   |.:.:|:.:.||..|....:...|:
Zfish   288 PLSGTCMRNTVPCRKQLKALNQTQDSAVYIKRCCKGFCIDILKKIAKNVKFTYDLYLVTNGKHGK 352

  Fly   273 ILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPI-VLVVPSGGSISPMGRLT 336
            .: :|.:.|::..:|....::.......::.||:::..|..:....| |:|..|.|::||...| 
Zfish   353 KI-NGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFL- 415

  Fly   337 RPFRYIIWSCILVSLIF-GFVLICLLKITALPGL-RNLVLGRRNRLPFM----GMWASLLGGLA- 394
            .||...:|..:.|.|:. ..:.:.:.:..:..|. |.|..||....|..    .:|  ||.||. 
Zfish   416 EPFSADVWIMMFVMLLLVSAIAVFIFEYFSPVGYNRCLADGREAGGPSFTIGKAIW--LLWGLVF 478

  Fly   395 -----LYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEV-------LAK 447
                 :.||:...::.::.:|....:|..|:||..|...:...|....:..||:.       .:.
Zfish   479 NNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNDFSP 543

  Fly   448 DYEFRILP------ALRTIFKDSMP-TTNFHA--VLSLEESL----------------YRL-RDE 486
            .:.|..:|      .:|..::|... ...||.  |:...|||                |.. |||
Zfish   544 PFRFGTVPNGSTERNIRNNYRDMHSYMVKFHQRNVVEALESLKTGKLDAFIYDAAVLNYMAGRDE 608

  Fly   487 DDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLMTAPLTFY---MRPHSYFKRRIDRLIMAMM 548
            ....:|:              |..|...:           |.|   ::..|.:||::|..|:.:.
Zfish   609 GCKLVTI--------------GSGKVFAS-----------TGYGIAIQKDSGWKRQVDLAILQLF 648

  Fly   549 SSGIVARYRKMYMDRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFILEILTTNHRR 612
            ..|.:.....:::..|....|...:..: |.:..::|:|........::||.||.|.:...|.|
Zfish   649 GDGEMEELEALWLTGICHHEKNEVMSSQ-LDVDNMAGVFYMLGAAMALSLITFIAEHVFYWHMR 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 17/87 (20%)
Lig_chan 343..593 CDD:278489 55/297 (19%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 40/223 (18%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 85/431 (20%)
DUF4013 <389..478 CDD:315788 25/91 (27%)
NMDAR2_C 704..1417 CDD:313729 2/8 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591418
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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