DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and LOC100149482

DIOPT Version :9

Sequence 1:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:466 Identity:88/466 - (18%)
Similarity:182/466 - (39%) Gaps:88/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 VATFEHRPYVIIE-----------DDPKTPGGRSIHGI---EGL-------------IFRSLAER 255
            |.|.|.||:||:|           |  ..|..|.::..   ||:             |.:.||..
Zfish   437 VVTLEERPFVIVELADAASGTCIRD--SVPCRRPLNASALQEGVAPVKQCCKGFCIDILKRLARI 499

  Fly   256 MNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPI- 319
            :.||..|....:...|:.: ||.:.|::..:|....::.......::.||:::..|..:....| 
Zfish   500 VGFTYDLYLVTNGKHGKKI-DGVWNGMVGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGIS 563

  Fly   320 VLVVPSGGSISPMGRLTRPFRYIIW-----SCILVSLIFGFVLICL--------LKITALPGLRN 371
            |:|..|.|::||...| .|:...:|     .|:.|..:..|:....        |:.....|...
Zfish   564 VMVSRSNGTVSPSAFL-EPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQSGKKAGGSK 627

  Fly   372 LVLGRRNRLPFMGMWASLL-GGLALYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            ..:|:...|    :||.:. ..:.:.||:...::.::::|....:|..|:||..|...:...|..
Zfish   628 FTIGKSIWL----LWALVFNNSVPVENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYI 688

  Fly   436 SPIKSLSEVLAKDYE----------FRILP--ALRTIFKDSMPTTNFHAV----LSLEESLYRLR 484
            ..:..||:   |.::          |..:|  :.....:.:.|..:.:.|    .|:|:::..|:
Zfish   689 DTVSGLSD---KKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMVKYNQKSVEDAISHLK 750

  Fly   485 DEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDPLM-TAPLTFYMRPHSYFKRRIDRLIMAMM 548
            ...   :...:....|..:..|.....:.:|:....:. |......:..:|.:||.:|..::.::
Zfish   751 TGK---LDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLV 812

  Fly   549 SSGIVARYRKMYM------DRIKRVSKRRNLEPKPLSIWRLSGIFVCCAGLYLVALIVFILEILT 607
            ....:....::::      |:|:.:|.:       |.|..::|:|........::|:||..|.|.
Zfish   813 GDDEIEMLERLWLSGICHNDKIEVMSSK-------LDIDNMAGVFYMLLVAMGLSLLVFAWEHLV 870

  Fly   608 TNHRRLRRAFN 618
              :.|||...:
Zfish   871 --YWRLRHCMS 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 19/88 (22%)
Lig_chan 343..593 CDD:278489 44/286 (15%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 73/407 (18%)
HisJ <487..>570 CDD:223904 17/83 (20%)
Lig_chan 585..857 CDD:278489 44/288 (15%)
NMDAR2_C 868..>900 CDD:287527 4/14 (29%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591654
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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